LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g3400	ATGGAACCAAGGAGTTGGATGTCGCATAGTAAGTCATTTGAGAAAAGTTCTTCCGAGTCAATGTCATCTCATTCACAAACTCATGATCAGGTATATGCCACTCATATTGTTCCATCTCCAGAAGTCATTTCCGAGGGTGCGTCAAATGAAGAGGTTGTTACTGATGTGCATACTCTAACTGGAAAATTATCCGCCGCTCTCTTAGACATTAGTGCCAAAGAAGATTTGGTAAAGCAGAATGCCAAAGTTGCGGAAGAAGCTGTCTCAGGCTGGGAGAAGGCTGAAAATGAAGTGTTGACTTTAAAACAGCAACTTGATGCTGCAAAACAGCAGAATGCGGTTCTTGAAGATCAAGTTAGTCATCTTAATGGGAAACTAAAGGATTGTATGAGGCAGCTTAGACAAGCTAGAGAAGAGCAAGAGCAAAAGACCCTTGAAGCTGTTGCAAACAACTCTTGTAATTGGGAATCCAAAAGAGACGAGCTTGAGTGGAAAGTTACTGAGCTTGAGGTTCAACTTCAAACAGCTAAAGAAGATGCTGCTACATCAGTTAACTCTGATCTTTTGCAGAGGCTCCAGGATGTGGAGAGGGAGAATTCAAGTCTGAAAATTGAACTACAATCTCGACTCGAGGAACTAAAATTCAAAACCATTGAATGGGATTTGAGCACCCAAGCTGCTGAAAGAGAAAGCAAGCAACATTTGGAGAGCATAACGAAGGTGGCTAAGCTTGAAGCCGAGTGCCAGAGATTGAATGCAGTGGCTCGCAAAACATTCTCTGTCAATGATCGCAGGTCTTTGACTTACTATTCCGTTTATGCAGAGTCATTCACAGATAGTATGTCAGATAATGGAGAGAGGCTATTGGTGGTTGAAAGTGACATGCACAAATTTGGAGGCAGGGAGATAAATGAAGGTGAACCAAAGCATTATGACTCATGGCCATCTGCTTCAATTACAGAATTGGATCAATTTAAGAATGAAAACACCACTGCACCAAACCGTATATGCCTTTCAACTCAGATTGATCTGATGGATGATTTCCTCGAAATGGAAAGGCTTGCTGCATTGCCAGATACTGCATCAGACCAACCTAATGTTGGCCAGGGAACAGACACAGTGTATGCTGAAGTGGAAGCATTGGTTCAAAAGAATGATGCGTTGGAGAAGAAGCTAGCGAAAATGGAGGCAGATAAAATAGAGCTAGAGATGGATTTAAATGAGTGCCAAAAGCAGCTCGTGGTATCACAAAGTCGGGTAAAGGAAGCAGAGTTGGAGGTAATTGAGCTTCAAACACAGTTAACTTTTGCAAATAAATCGATCAAAGAAGAATATGAAGAACTTAAAGCATCCCGAGCAAAAAATGAGAAAGTTGAGTCAAAGCTGAGAGCTGCTCAAACTGAGGTGGAAGAATTGATTTCAAAAATCTGTTCACTGGAGGAAGAGATTGATAAAGAGCGGGCTTTGTCTGCAGATAAACTTGAGCTAGAGGTTGATTTAATCGAGTGCCAAAAACAGCTCAAGGTATCACAAAGTCGGGTAAAGGAAGTGGAGTTGGAGGTGATTGAGCTTCAAAAACAGTTAGTTGTTGCAAATAAATCAAACGAAGAAGAATATGAAGAACTAAAAGTATCCCGAGCAAAAAATGAGAATGCTGAGTCAAAACTGAGAGCTACTCAAACTGAGGCAGAAGAATTGATCTCAAAAATCTGTTCACTGGAGGAAGAGATTGAGAAAGAGCGGGCTTTGTCTGCTGGTAATTTGGCCAAGTGTGAAAAGTTGGAAGAAGAGCTTTTGAGAGTGAAGAAAGAAACTCAACTTCATCAAGACACTGAGACACTGCATAGGGAAGGTGTTGATAGCGAGTTAATGTTCAAGCAGGAGAAGGAACTGGCATTGGCTGCTACTAGATTTTCCGAGTGTCGGAAAACCATCGAATCTCTAGGACAGAAGTTGATGTCCCTTGCAACATTGGAAGACTTCATATTTGATTCAGAGGACACTATGGAGTTAACTAGTGAAGTTACACCACCAGGTCCCCAAGATGGCGGTGAGCAGTTGAAATTACATAATAGTGATTTGAGTTTTCCAAAAAGAGATTCATCAACTTCGCTAAATCCATCTAATAGCTTTGGAAAAAGCCACTTTAGTTTTGGTAGGTTCTATCCTACAAGGGCTTAA	2181	0.4127	MEPRSWMSHSKSFEKSSSESMSSHSQTHDQVYATHIVPSPEVISEGASNEEVVTDVHTLTGKLSAALLDISAKEDLVKQNAKVAEEAVSGWEKAENEVLTLKQQLDAAKQQNAVLEDQVSHLNGKLKDCMRQLRQAREEQEQKTLEAVANNSCNWESKRDELEWKVTELEVQLQTAKEDAATSVNSDLLQRLQDVERENSSLKIELQSRLEELKFKTIEWDLSTQAAERESKQHLESITKVAKLEAECQRLNAVARKTFSVNDRRSLTYYSVYAESFTDSMSDNGERLLVVESDMHKFGGREINEGEPKHYDSWPSASITELDQFKNENTTAPNRICLSTQIDLMDDFLEMERLAALPDTASDQPNVGQGTDTVYAEVEALVQKNDALEKKLAKMEADKIELEMDLNECQKQLVVSQSRVKEAELEVIELQTQLTFANKSIKEEYEELKASRAKNEKVESKLRAAQTEVEELISKICSLEEEIDKERALSADKLELEVDLIECQKQLKVSQSRVKEVELEVIELQKQLVVANKSNEEEYEELKVSRAKNENAESKLRATQTEAEELISKICSLEEEIEKERALSAGNLAKCEKLEEELLRVKKETQLHQDTETLHREGVDSELMFKQEKELALAATRFSECRKTIESLGQKLMSLATLEDFIFDSEDTMELTSEVTPPGPQDGGEQLKLHNSDLSFPKRDSSTSLNPSNSFGKSHFSFGRFYPTRA*	727

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g3400	726	Coils	Coil	185	212	-	-
	Mtr3g3400	726	MobiDBLite	consensus disorder prediction	696	715	-	-
	Mtr3g3400	726	MobiDBLite	consensus disorder prediction	10	32	-	-
	Mtr3g3400	726	Coils	Coil	500	569	-	-
	Mtr3g3400	726	Coils	Coil	91	150	-	-
	Mtr3g3400	726	Coils	Coil	159	179	-	-
	Mtr3g3400	726	MobiDBLite	consensus disorder prediction	671	726	-	-
	Mtr3g3400	726	PANTHER	FILAMENT-LIKE PLANT PROTEIN 4	491	725	-	-
	Mtr3g3400	726	PANTHER	FILAMENT-LIKE PLANT PROTEIN 4	1	494	-	-
	Mtr3g3400	726	PANTHER	FILAMENT-LIKE PLANT PROTEIN	491	725	-	-
	Mtr3g3400	726	PANTHER	FILAMENT-LIKE PLANT PROTEIN	1	494	-	-
	Mtr3g3400	726	Coils	Coil	378	475	-	-
	Mtr3g3400	726	MobiDBLite	consensus disorder prediction	1	32	-	-
	Mtr3g3400	726	Coils	Coil	591	611	-	-
	Mtr3g3400	726	Pfam	Filament-like plant protein, long coiled-coil	312	361	IPR008587	-
	Mtr3g3400	726	Pfam	Filament-like plant protein, long coiled-coil	182	257	IPR008587	-
	Mtr3g3400	726	Pfam	Filament-like plant protein, long coiled-coil	489	657	IPR008587	-
	Mtr3g3400	726	Pfam	Filament-like plant protein, long coiled-coil	73	179	IPR008587	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g3400	Mtr-Chr3	47870283	47874381	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g3400	-		-	aip:107613274	631.713

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr3g3400	3	47870283	47874381	Mtr3g3400	3	47870283	47874381	ECH
	Mtr8g3322	8	43703922	43708419	Mtr3g3400	3	47870283	47874381	ECH