Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3315 ATGAAGATAGGTAAGGTTGGATTAGGGGTGATGATGGTTGTATTGATGATGATGTTAAACTTGTCTACTTGTTCAGCTTGGTTTGGTAATAAACGCAAAAGTGGAAGAAACTCAATTTTACCAGGTGAAGCTATGTCTTCAAGACCAAGTCTCATGAACCATGCTGCTGGTTCCTCAATTGTGTTCCCTATTTATGGCAATGTTTATCCTGTTGGGTTCTATAATGTTACTCTCAACATAGGCCAACCACCAAGGCCCTATTTTCTTGATGTTGACACCGGTAGTGAACTCACATGGCTCCAATGTGATGCTCCTTGTTCCCAATGTTCTGAGACACCCCATCCACTCTATAAGCCTAGCAATGATTTTATACCTTGCAAAGATCCACTCTGTGCGTCCTTGCAGCCCACGGATGACTACACATGTGAAGACCCTAATCAATGTGACTACGAAATTAAGTATGCTGATCAATACTCAACCCTTGGTGTACTTCTAAATGATGTCTACCTTCTCAACTTCACCAATGGAGTCCAACTTAAAGTTAGAATGGCACTGGGATGTGGATATGACCAGATATTTTCACCTTCAACTTACCACCCTTTAGATGGAATACTTGGTCTTGGAAGGGGAAAGGCCAGCTTGATATCACAGCTGAATAGCCAGGGTTTGGTGCGAAATGTGATGGGACATTGTTTAAGCTCGCGAGGAGGAGGATACATTTTCTTTGGAAATGTTTATGATTCTTCTCGAATGAGTTGGACTCCAATCTCATCAATCGATTCGGGAAAACATTACTCTGCAGGACCAGCTGAACTTGTTTTTGGAGGAAGGAAGACTGGGGTGGGAAGTTTAAATATTATTTTTGACACTGGAAGTTCCTATACATACTTCAATTCTCAGGCTTACCAAGCAATGATTTCTTTGCTGAATAAGGAATTACATAGAAAGCCAATAAAAGCAGCACCTGATGACCAGACTTTACCTATGTGCTGGCATGGTAAAAGACCTTTCAGAAGCATAAATGAAGTGAAGAAATACTTCAAGCCACTAACACTTAGTTTCACCAATGGTGGAAGAGTTAAACCACAGTTTGAGATCCCTCCTGAAGCTTATCTTATAATATCTAATATGGGAAATGTTTGTCTAGGAATTCTGAACGGCCCTGAAGTAGGATTGGGTGAACTGAACCTAATTGGAGACATATCCATGCTAGACAAAGTGATGGTATTCGACAACGAGAAGCAGTTGATTGGATGGGGACCTGCAGATTGCAACAGTGTTCCAAAATCCAGAGATTTCAGTTTATGA 1308 0.4106 MKIGKVGLGVMMVVLMMMLNLSTCSAWFGNKRKSGRNSILPGEAMSSRPSLMNHAAGSSIVFPIYGNVYPVGFYNVTLNIGQPPRPYFLDVDTGSELTWLQCDAPCSQCSETPHPLYKPSNDFIPCKDPLCASLQPTDDYTCEDPNQCDYEIKYADQYSTLGVLLNDVYLLNFTNGVQLKVRMALGCGYDQIFSPSTYHPLDGILGLGRGKASLISQLNSQGLVRNVMGHCLSSRGGGYIFFGNVYDSSRMSWTPISSIDSGKHYSAGPAELVFGGRKTGVGSLNIIFDTGSSYTYFNSQAYQAMISLLNKELHRKPIKAAPDDQTLPMCWHGKRPFRSINEVKKYFKPLTLSFTNGGRVKPQFEIPPEAYLIISNMGNVCLGILNGPEVGLGELNLIGDISMLDKVMVFDNEKQLIGWGPADCNSVPKSRDFSL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3315 435 ProSiteProfiles Peptidase family A1 domain profile. 74 420 IPR033121 -
Mtr8g3315 435 PANTHER ASPARTYL PROTEASES 5 429 IPR001461 GO:0004190|GO:0006508
Mtr8g3315 435 Gene3D Acid Proteases 243 429 IPR021109 -
Mtr8g3315 435 SUPERFAMILY Acid proteases 66 427 IPR021109 -
Mtr8g3315 435 Pfam Xylanase inhibitor C-terminal 282 419 IPR032799 -
Mtr8g3315 435 Pfam Xylanase inhibitor N-terminal 74 244 IPR032861 -
Mtr8g3315 435 PRINTS Pepsin (A1) aspartic protease family signature 80 100 IPR001461 GO:0004190|GO:0006508
Mtr8g3315 435 PRINTS Pepsin (A1) aspartic protease family signature 286 297 IPR001461 GO:0004190|GO:0006508
Mtr8g3315 435 PRINTS Pepsin (A1) aspartic protease family signature 396 411 IPR001461 GO:0004190|GO:0006508
Mtr8g3315 435 Gene3D Acid Proteases 50 242 IPR021109 -
Mtr8g3315 435 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3315 Mtr-Chr8 43627931 43632034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3315 58 430 Miscellaneous Gene Families AT1G44130 53.316 4.45e-145 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3315 - - gmx:100783873 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3315 8 43627931 43632034 Mtr8g3315 8 43627931 43632034 ECH
Mtr8g3315 8 43627931 43632034 Mtr3g3395 3 47818559 47835189 ECH