Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3395 ATGTACATGACTTATGACCTTGTTGATAGCTTGGAATTGTTTCTGGTGACATGTGCTCATGGTCTTCCACAATTCAAGTTTTATAATGTGACTATCAACATTGGGTACCCACCAAGGCCATATTTTCTTGATATTGACACTGGTAGCGACCTAACATGGCTTCAATGTGATGCACCTTGTTCCCGTTGCTCTCAGACACCACATCCACTTTACCGGCCTAGCAATGACTTGGTCCCCTGCAGGCATCCCCTTTGTGCATCGGTGCATCAGACGGATAACTATGAATGTGAAGTCGAGCATCAATGTGACTATGAAGTTGAGTATGCAGATCATTACTCTTCTCTTGGTGTACTTGTCAATGATGTTTATGTTCTCAACTTTACAAATGGAGTCCAGCTTAAAGTTCGTATGGCACTTGGATGCGGATATGATCAGATTTTTCCAGATTCTTCCTACCACCCCGTAGATGGAATGCTTGGCCTTGGCAGGGGCAAATCCAGCTTGATATCACAACTGAATGGTCAGGGTTTGGTGAGAAATGTCGTTGGACACTGTTTGAGTGCACAAGGAGGAGGATACATCTTCTTTGGAGATGTTTATGATTCTTCTCGATTGGCTTGGACTCCAATGTCGTCGAGAGATTACAAACATTACTCAGCTGGGGCTGCTGAACTTGTTCTTGGAGGAAAGAGGACTGGTTTTGGAAATCTTCTTGCTGTTTTTGATGCTGGGAGTTCTTATACTTACTTCAACTCTAATGCTTATCAAGCACTAATTTCTTGGTTGACGAAGGAATTAGCTGGAAAGCCCATAAAAGAAGCACCTGAAGACCAAACTCTTCCTCTGTGTTGGTATGGAAAAAGACCTTTTAGAAGTGTATATGAAGTCAAAAAATACTTCAAGCCTATTGCACTTAGCTTCCCAGGAAGTAGAAGATCGAAAGCCCAATTTGAAATCCCTCCTGAAGCATATTTGATTATATCTAACATGGGAAATGTTTGCTTGGGCATTCTAGACGGCTCTGAAGTAGGAGTGGAAGATCTAAACCTAATCGGAGACATATCCATGCTAGACAAAGTGATGGTATTTGACAATGAGAAGCAGTTGATAGGTTGGACAGCAGCAGATTGTAACCGAGTTCCAAAATCCAAAGATGTCAGCATTTGA 1167 0.4216 MYMTYDLVDSLELFLVTCAHGLPQFKFYNVTINIGYPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHPLCASVHQTDNYECEVEHQCDYEVEYADHYSSLGVLVNDVYVLNFTNGVQLKVRMALGCGYDQIFPDSSYHPVDGMLGLGRGKSSLISQLNGQGLVRNVVGHCLSAQGGGYIFFGDVYDSSRLAWTPMSSRDYKHYSAGAAELVLGGKRTGFGNLLAVFDAGSSYTYFNSNAYQALISWLTKELAGKPIKEAPEDQTLPLCWYGKRPFRSVYEVKKYFKPIALSFPGSRRSKAQFEIPPEAYLIISNMGNVCLGILDGSEVGVEDLNLIGDISMLDKVMVFDNEKQLIGWTAADCNRVPKSKDVSI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3395 388 Pfam Xylanase inhibitor C-terminal 239 372 IPR032799 -
Mtr3g3395 388 SUPERFAMILY Acid proteases 27 380 IPR021109 -
Mtr3g3395 388 Gene3D Acid Proteases 198 381 IPR021109 -
Mtr3g3395 388 Gene3D Acid Proteases 15 197 IPR021109 -
Mtr3g3395 388 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 18 382 - -
Mtr3g3395 388 PANTHER ASPARTYL PROTEASES 18 382 IPR001461 GO:0004190|GO:0006508
Mtr3g3395 388 ProSiteProfiles Peptidase family A1 domain profile. 28 373 IPR033121 -
Mtr3g3395 388 Pfam Xylanase inhibitor N-terminal 28 198 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3395 Mtr-Chr3 47818559 47835189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3395 27 383 Miscellaneous Gene Families AT1G44130 51.389 4.43e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3395 - - gmx:100819172 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3395 3 47818559 47835189 Mtr3g3395 3 47818559 47835189 ECH
Mtr8g3315 8 43627931 43632034 Mtr3g3395 3 47818559 47835189 ECH