Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3280 ATGTCGAATCAAAATGTGGATTCGCCGAAAGGTCAATCGATGCAGATGAGAAGAGCGACATCGAGAGGCGCAGCAACGACGTTCTCGTTGGAGGTGTTTGACAATGAAGTTGTGCCGGCGTCACTCGCTTCGATCTCGCCTATTCTCAGAGTCGCTAACGAGATCGAAACAGAGCGTCCTCGAGTTGCGTATCTATGTAGATTTTATGCATTCGAGAAAGCGCACAGGTTGGATCAGAGTTCCAGTGGCCGTGGTGTTAGGCAGTTTAAGACTTTGTTGCTGCAACGATTGGAGAGGGACAATGCAACCAGTCTTGCCTCTCGGGTTAAGAAGACAGATGCAAGGGAAATCCAGGCTTATTATCAACAATATTATGAACAATATGTCAGAGCTCTTGACCAAGCGGATCAGGCAGACAGGACCCAGCTCAGTAAAGCTTACCAGACTGCTGGGGTGCTCTTTGAAGTGCTTTGTGCCGTTAACAAGACTGAGAAGGTCGAAGAAGTAGCTCCTGAGATTATTGCCGCTGCCAGAGATGTCCAGGAAAACCTGGAGATTTATGCACATTCATATAATATTCTTCCTCTAGATGCTGCTGGTGCTTCTCTGCCCATTATGCAGTTTGAAGAGATTAAGGCTGCTGTTTCTGCGCTCTGGAACACTCGTGGCTTGAACTGGCCTGGCTCATTTGAGCAACAGAGGCAGAGAACCGGAGATTTGGACATGCTTGATTGGCTTAGAGCAATATTTGGCTTCCAGAAGGACAGCGTGAGGAATCAAAGAGAGCATTTGATTCTGCTTCTTGCTAACTCGCATATAAGGCTACACCCTAAACCCGAGCCTTTTAACAAGCTCGATGATCGTGCTGTTGATTCTGTGATGAAAGAACTTTTTAAGAATTACAAAACGTGGTGCAAATTCTTGGGACGGAAGCATAGTTTGCGACTGCCTCAAGGTCAGCCAGACATACAGCAGAGGAAGTTGCTTTATATGGGATTGTATCTTCTCATTTGGGGTGAAGCGTCAAATGTTCGATTCATGCCAGAGTGTCTGTGCTATATATTTCACAATATGGCATATGAACTGCATGGTTTATTGGCTGGAAATGTCAGCATTGTCACTGGTGAAAATATCAAGCCTTCTTATGGTGGAGATGACGAGGCATTCCTACGAAAGGTTATCACACCCATATACCGAGTAATTGAGAAGGAATCTAAGAAAAGCAGAAATGGAAAGGCTTCACACTCAGCATGGTCCAACTATGATGATCTAAATGAGTATTTTTGGTCACTTGATTGCTTTTCTCTTGGATGGCCTATGCGTGATGATGGTGATTTTTTTAAATCCACAAGTGATTTGACACAGGGAAGAAAGGGTGCATCAAGAAAATCTGGGAAACTTGGAAAATCAAATTTTATTGAAACACGGACATTTTGGCACATCTTCCGCAGTTTTGATCGTCTCTGGACCTTTTTTTTACTGGGTTTGCAGGTGATGTTCATTATTGCATGGGATGGAATTTCAATTATGGATATCTTTCAGAAGGATGTTTTATATAAACTGTCTAGTATATTCATCACAGCATCCATTCTGCGCTTACTTCAAAGTATCTTGGACCTAGTCCTGAACTTTCCAGGCTATCATCGATGGAAATTCACCGATGTGCTCAGAAATATTCTTAAAGTCATTGTCTGCTTTATATGGGTTATCATTCTTCCATTCTTTTATGTACAATCTTTCAAGGGTGCACCTCAGGGCCTCAAGGAGCTGCTTGTTTTTTTCAAACAAATAAAAGGCATCCCACCATTGTACATGCTGGCAGTTGCATTGTATATGCTACCAAATTTATTAGCAGCTGCTCTCTTTCTTTTCCCAATGCTAAGGCGTTGGATTGAAAACTCAGATTGGCACATAGTTAGGTTATTCTTATGGTGGTCTCAGCCAAGAATATATGTTGGAAGAGGAATGCATGAAAGTCAATATGCTCTCCTAAAGTATACTTTTTTCTGGGTGTTACTTTTGGCTTCAAAATTTTTATTCAGCTTTTATGTCCAGATAAAACCTCTAGTTAAGCCAACCAAGGACATAATGAGCATTCAACATGTTGATTATGCTTGGCATGAGTTTTTCCCCAATGCTCGAAACAACTATTGTGCAGTTGGTGCACTTTGGGGTCCCGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATGCAATCTTCTCAACTTTGTATGGTGGCATTGTTGGAGCCTTTGATCGTCTAGGAGAGATACGCACTCTGAGCATGCTAAGATCACGGTTTCAGTCATTGCCTGGTGTATTCAACACATGCTTGGTTCCTTCTAATAAGAAAAAAGGCAGATTTTTCTTCTCAAAGCAATCTTCTGAGAATTCTGCAAGCAGAAGGAGCGAAGCTGCCAAATTTGGCCAATTATGGAATGAAATTATTTGCAGTTTTCGTGAGGAAGATCTCATAAGTGATAGGGAGATGGATCTTTTGCTGGTTCCTTACTCATTGGGTCCTGATCTCAAAATAATTCAGTGGCCACCATTTTTGCTTGCAAGCAAGATTCCTGTAGCACTGGATATGGCAACTCAATTTCGAGGGAGGGACTCTGATCTTTGGAAGCGCATATGTGCAGATGAATATATGAAATGTGCTGTAATTGAATGCTATGAATCTTTTAAACAAATTCTACACGATTTGGTGATAGGAGAAACTGAAAAAAGGATAATTTCCATCATTGTTAAAGAAGTCGAGAGCAACATGACAAAGAACACACTTACTATAAATTTCCGGATGGGCTTCTTACCCTCCCTTTGCAAGAAGTTTGTGGAGCTTGTGGAACTCTTAAAAAATGCAGATCCAACAAAGGGAGGTATAGTGGTGGTCTTGCTGCAGGACATGTTAGAAGTGGTTACTGATATGATGGTGAATGAAATCAGTGAATTAGCAGAACTTCATCAAATTAGTAAGGATACTGGAAAGCAAGTTTTTGCTGGTACTGAGGCAATGCCTGCTATAGCATTCCCTCCTGTGGTTACAGCACATTGGGAGGAACAGTTAAGACGTCTCTATCTACTCTTGACGGTGAAAGAATCAGCCATTGAGGTTCCAACAAATAGTGAAGTACGCAGAAGGATTGCATTCTTTACAAATTCATTGTTCATGGATATGCCTCGTGCTCCCTGTGTCCGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACCGTGTACTCTAAGAATGACATTGAGGTTGAAAATGAAGATGGTGTGTCAATCATATATTATTTGCAAAAGATCTTCCCTGATGAATGGAATAACTTCATGGAGCGACTTGATTGTAAGAAAGATAGTGAAATATGGGAAAAAGATGAGAATATATTACAACTACGTCACTGGGCCTCATTAAGAGGACAAACTCTTTGCCGGACAGTTAGGGGAATGATGTACTACCGGAGGGCGTTAAAGCTCCAGGCATTTCTTGATATGGCTAGTGACAAAGAGATCCTTGATGGATATAAAGCTATTACACTTCCATCTGAGGAAGACAAAAAGAGTCATAGGTCCCTATATGCCAATTTAGAGGCTATGGCTGACATGAAATTCACATATGTTGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGCGGAGACCGCCGTGCTACGGATATCTTGAATTTGATGGTTAACAATCCCTCACTCCGTGTTGCATATATTGATGAAGTTGAAGAAAGAGAAGGTGGACAAGTGCAGAAAGTTTATTATTCTGTACTGATCAAAGCGGTGGACAAACGTGACCAAGAAATATTTCGAATAAAACTTCCGGGTCCAGCAAAATTAGGAGAAGGGAAGCCAGAAAACCAAAACCATGCAATTATTTTTACTAGAGGGGAAGCTCTTCAAACTATTGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGCAATCTTCTGGAAGAATTTAATGAGGATCATGGAGTGCGCCCGCCTACCATACTAGGTGTTCGTGAGCATATCTTTACTGGCAGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCATTAAAGGTTCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAATTTTCCATGTAACCCGCGGAGGAATCAGCAAGGCTTCTCGTGGCATCAATCTGAGCGAGGATATATTTGCTGGATTCAACTCAACACTAAGACGTGGGAATATTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGGGATGTCGGGCTCAACCAAATATCTCTTTTTGAAGCAAAAGTAGCCTGTGGTAATGGAGAGCAGATACTAAGCAGGGATATCTACCGGTTGGGGCATCGATTTGACTTTTTCCGCATGCTATCGTTTTATTTTACAACCGTTGGGTTTTATATCAGCTCAATGTTAGTGGTCATGACGGTTTATGCTTTCTTATATGGCAAACTTTACCTATCATTGAGTGGAGTTGAGGCTGCTATAGTTAAGTTTGCTAGAAGGAAAGGGGATGACCCTTTGAAGGCAGCAATGGCTTCTCAATCTCTTGTTCAAATAGGTCTTCTAATGACTCTGCCCATGATCATGGAAATTGGACTAGAGAGAGGATTCAGAACTGCTTTAGGCGACCTCATAATAATGCAGCTGCAGCTTGCACCTGTTTTCTTCACTTTCTCACTAGGGACAAAGCTGCACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGGCATGAGAAGTTTGCAGATAACTACAGGATGTACTCCAGGAGTCACTTTGTTAAGGGGATAGAGTTAGCTTTACTTCTCATATGTTATATGATTTATGGAGCGGCAACTCCTGACTCAACAGCATATGCACTTCTCTCATGCTCAATGTGGTTTTTGGTAGGTTCTTGGTTGTTTAGTCCTTTCCTTTTTAATCCATCGGGATTTGAGTGGCAGAAGATCTATGAGGATTGGGATGATTGGTCAAAATGGATAAGTAGTCGAGGTGGTATTGGTGTTCCTTCAACAAAGAGCTGGGAATCATGGTGGGATGAGGAACAGGAGCATCTGCAGCACACTGGAATGTGGGGGCTGATTTGGGAGATAGTTCTGGCCCTTCGTTTCTTTCTATACCAGTATGGGATTGTGTATCATTTACATGTAGCCAGAGGTGACCAGAGCATCATGGCTTATGGTCTGTCCTGGCTAGTCATAGTAGCTGTTATGATCATCTTGAAGGTCGTGTCCATGGGTAGAAAGACTTTTAGTGCCGATTTTCAGCTCATGTTTCGTCTCCTCAAGTTGATTCTGTTTATTGGAGCTGTTGTCATTCTAATCTTGATGTTTACTCTATTTAGTTTTACATTTGGAGACATCTTTGCGAGTCTTCTAGCATTTTTGCCAACAGGCTGGGCACTTGTACAGATAGCACAAGCATGTCGGCCGGTAGTAAAAGCCATTGGAATGTGGGGTTCTGTCAAAGCTTTATCAAGAGGGTATGAATACCTTATGGGGGTGGTTATCTTTACACCAGTGGCCATATTAGCTTGGTTTCCGTTTGTTTCGGAATTTCAAACCAGACTGCTATACAATCAAGCATTCAGCAGAGGGCTTCAAATCCAGCGGATTCTCGCTGGTGGCAAGAAGAATAAATAA 5757 0.419 MSNQNVDSPKGQSMQMRRATSRGAATTFSLEVFDNEVVPASLASISPILRVANEIETERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNATSLASRVKKTDAREIQAYYQQYYEQYVRALDQADQADRTQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQENLEIYAHSYNILPLDAAGASLPIMQFEEIKAAVSALWNTRGLNWPGSFEQQRQRTGDLDMLDWLRAIFGFQKDSVRNQREHLILLLANSHIRLHPKPEPFNKLDDRAVDSVMKELFKNYKTWCKFLGRKHSLRLPQGQPDIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYRVIEKESKKSRNGKASHSAWSNYDDLNEYFWSLDCFSLGWPMRDDGDFFKSTSDLTQGRKGASRKSGKLGKSNFIETRTFWHIFRSFDRLWTFFLLGLQVMFIIAWDGISIMDIFQKDVLYKLSSIFITASILRLLQSILDLVLNFPGYHRWKFTDVLRNILKVIVCFIWVIILPFFYVQSFKGAPQGLKELLVFFKQIKGIPPLYMLAVALYMLPNLLAAALFLFPMLRRWIENSDWHIVRLFLWWSQPRIYVGRGMHESQYALLKYTFFWVLLLASKFLFSFYVQIKPLVKPTKDIMSIQHVDYAWHEFFPNARNNYCAVGALWGPVLMVYFMDTQIWYAIFSTLYGGIVGAFDRLGEIRTLSMLRSRFQSLPGVFNTCLVPSNKKKGRFFFSKQSSENSASRRSEAAKFGQLWNEIICSFREEDLISDREMDLLLVPYSLGPDLKIIQWPPFLLASKIPVALDMATQFRGRDSDLWKRICADEYMKCAVIECYESFKQILHDLVIGETEKRIISIIVKEVESNMTKNTLTINFRMGFLPSLCKKFVELVELLKNADPTKGGIVVVLLQDMLEVVTDMMVNEISELAELHQISKDTGKQVFAGTEAMPAIAFPPVVTAHWEEQLRRLYLLLTVKESAIEVPTNSEVRRRIAFFTNSLFMDMPRAPCVRKMLSFSVLTPYYSEETVYSKNDIEVENEDGVSIIYYLQKIFPDEWNNFMERLDCKKDSEIWEKDENILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMASDKEILDGYKAITLPSEEDKKSHRSLYANLEAMADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGQVQKVYYSVLIKAVDKRDQEIFRIKLPGPAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHVTRGGISKASRGINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDIYRLGHRFDFFRMLSFYFTTVGFYISSMLVVMTVYAFLYGKLYLSLSGVEAAIVKFARRKGDDPLKAAMASQSLVQIGLLMTLPMIMEIGLERGFRTALGDLIIMQLQLAPVFFTFSLGTKLHYFGRTLLHGGAKYRATGRGFVVRHEKFADNYRMYSRSHFVKGIELALLLICYMIYGAATPDSTAYALLSCSMWFLVGSWLFSPFLFNPSGFEWQKIYEDWDDWSKWISSRGGIGVPSTKSWESWWDEEQEHLQHTGMWGLIWEIVLALRFFLYQYGIVYHLHVARGDQSIMAYGLSWLVIVAVMIILKVVSMGRKTFSADFQLMFRLLKLILFIGAVVILILMFTLFSFTFGDIFASLLAFLPTGWALVQIAQACRPVVKAIGMWGSVKALSRGYEYLMGVVIFTPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK* 1919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3280 1918 Coils Coil 1316 1336 - -
Mtr8g3280 1918 SMART FKS1_dom1_2 325 441 IPR026899 -
Mtr8g3280 1918 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g3280 1918 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 14 1917 - -
Mtr8g3280 1918 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 14 1917 - -
Mtr8g3280 1918 Pfam Vta1 like 44 170 IPR039431 -
Mtr8g3280 1918 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 327 438 IPR026899 -
Mtr8g3280 1918 Pfam 1,3-beta-glucan synthase component 1040 1126 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Mtr8g3280 1918 Pfam 1,3-beta-glucan synthase component 1131 1734 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Mtr8g3280 1918 Gene3D - 30 184 IPR023175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3280 Mtr-Chr8 43285604 43301566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3280 7 1918 Glycosyltransferase AT1G05570 60.809 0.0 2397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3280 K11000 - gmx:100779472 3427.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3280 8 43285604 43301566 Mtr8g3280 8 43285604 43301566 ECH
Mtr3g3348 3 47415010 47431156 Mtr8g3280 8 43285604 43301566 PCT