Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3348 ATGTCGAGTCTCGAGCCAGCACCTTCAACGTTAACTCGACGTCCGTCGAGAAGCGCTGCCATGACCACCGTCTCGATGGAGGTTTTTGACAATGACGTTGTCGTCCCTTCATCACTCGCCACAATTTCACCTATTCTCCGTGTGGCCAACGAGATCGAAAGTGAACGCCCTAGGGTTGCCTATCTATGTCGATTTTATGCGTTCGAAAAGGCACATCGATTGGATCAAAGCTCAAGCGGGCGTGGTGTGAGGCAATTCAAAACGCTGTTGCTGCAACGATTGGAGAGGGACAATGCTACCAGTCTTGCTGCTCGGACTAAGAAGACAGATGCAAGAGAAATCCAAGTTTATTATCAGCAATACTATGAGAACTATGTCAAAGCACTTGACCAAGGAGAGCAGGCTGACAGAGCACAGCTTGGTAAAGCTTACCAGACCGCCGGTGTGCTTTTTGAAGTGCTTTGTGCTGTTAACAAGACTGAGAAAGTCGAAGAAGTTGCTCCTGAGATTATTGCAGCTGCTAGAGATGTCCAGGAAAAGACGGAAATTTATGCCCCTTTTAACATTCTTCCGTTGGATTCTGCCGGGGCTTTTCAGCCTATTATGCAGCTTGAAGAGATTAAGGCAGCTGTTTCTGCGCTTTTTAATACTCGTGGCTTGAACTGGCCTAGTGCATTCGAGCAAACTCGCCAGAGAACTGGAGATTTGGATCTGCTTGATTGGCTCAGAGCCATGTTTGGGTTCCAGAGAGACAATGTCAGGAATCAGAGAGAGCATCTAATTTTGCTTCTTGCTAACAACCATATAAGGCTACACCCCAAACCCGAGCCTCTCAACAAGCTTGATGACCGCGCGGTCAATTCAGTGATGACTGATCTCTTTAAGAATTACAAAACATGGTGCAAATTTTTGGGACGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGAGATACAACAGAGAAAGTTGCTTTATATGGGCTTGTATCTTCTCATATGGGGTGAAGCGTCCAATCTTCGCTTCATGCCAGAGTGTATATGCTACATATTTCACAATATGGCATATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAATATCAAACCTTCTTATGGTGGTGATGATGAGGCATTCTTGCGCAAGGTTATATCTCCCATATACAAAGTCATTCATACGGAAGCTGAGAAAAGCAGAAATGGAATGGCTCCTCACTCAGCCTGGTGCAATTACGATGATCTAAATGAGTATTTCTGGACACCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTTTTTAAATCTACATTTAATTTGACACAGGGAAGAAAAGGTGCTCCGGCAAAATCTGCAAGAACTGGCAAATCAAATTATGTTGAGACCCGGTCATTCTGGAACCTCTTCCGCACTTTTGATCGTCTTTGGACCTTTTATATACTGGGTTTGCAGGCGATGTTCATAATTGCATGGGGAAATATTTCAGTGTTGGAAATATTTCAAAAAGATGTCTTATATAAACTTTCTAGCATATTCATCACAGCAGCCTTTCTTCGTTTACTTCAAAGTATCTTGGACCTGAGTCTGAATTTTCCTGGCTTTCATCGCTGGAAATTCACTGATGTGCTAAGAAATGTTCTCAAAGTCATTGTTAGTCTTTTATGGGTTATTGTTCTTCAAATATTTTACGTGCATTCCTTCGACGGTGCCCCAGAGTTTATCAGGAAGTTGCTTTCTTTTGTTCATCAAATGAAAGGGATTCCACCATATTATGTCTTAGCAGTTGCAGTTTATCTGATCCCAAATGTACTAGCGGCCCTTCTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATATTTAGACTCCTCTTATGGTGGCAACAGCCAAGAATCTATGTCGGACGAGGGATGCACGAGAGTCAACTTTCCCTCCTAAAGTACACTCTTTTCTGGGTGCTTCTTTTGGCTGCAAAATTTTCATTCAGCTTTTTTGTCCAGATCAAACCTCTTGTTAAGCCAACTAAGGACATAATGAGCATTCGACATGTTGATTATAATTGGCATCAGTTTTTCCCACAGGCTCAAAATAATTATAGTGCAGTTGCTGCACTCTGGGTTCCTGTACTTATGGTTTATTTCATGGACACCCAAATTTGGTATGCCATCTTCTCAACTGTGTGTGGCGGTGTTCTTGGAGCCTTCGATCGTCTGGGAGAGATACGCACTTTGAGCATGCTAAGATCACGGTTTCAGTCATTGCCTGGTGCATTCAACACATACTTGGTTCCCACTGACAGGAGAAAGAAAAAGAAATTCTCCCTCTCTAAGCGATTTGCCGAGATTTCCGCCAACAGAAGGAGTGAAGCTGCTAAATTTGCCCAATTATGGAACGAAATTATTTGCAGTTATCGCGAAGAAGATATTATAAGTGATAGGGAGATGGATCTTTTGTTGGTTCCTTACTCATCAGATCCTAGCCTGAAAATAATTCAATGGCCACCATTTATGCTTGCAAGCAAGATTCCTATTGCACTGGATATGGCAGCTCAATTTCGAGGTAGGGACTCTGATCTTTGGAAGCGCATATGTGGAGACGAATATATGAAATGTGCGGTGCTTGAATGCTATGAATCTTTCCAACAAATTTTGAACACTTTAGTGATTGGAGAAGCTGAAAAAAGGACAATCTCTATCATCCTAAAGGAAGTTGAAAACAGCATTTCTAAAAATACACTGCTTACAAATTTCCGAATGGGATTTTTGCCTTCCCTTTGCAAGAAATTTGTGGAGCTTGTCGAAATTCTGAAAGCTGCAGATTCATCCAAGCGCAACACAGTGGTGGTATTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGATGGTGAATGACAGCAGCGAATTAGCAGAACTTAATCTTAGTAGCAAGGATACTGGAAGGCAACTTTTTGCTGGTACTGATGCAAAACCGACCGTACTCTTCCCTCCAGTTGTTACATCACAATGGGAGGAGCAGATTAGACGTCTTCACTTGCTGTTGACGGTGAAGGAATCTGCCATTGAGGTTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACCAATTCGCTGTTCATGGATATGCCTCGTGCTCCTAGAGTTCGTAAAATGCTCTCGTTCAGTGTCATGACTCCATACTACAGTGAAGAGACTGTCTACTCAAAGAATGACCTTGAGGTTGAAAATGAAGATGGTGTGTCAATCATATATTACCTGCAGAAGATATACCCTGATGAGTGGAATAACTTCATGGAGCGACTTAATTGTAAGAAAGATAGTGAGGTTTGGGAAAGAGATGAGAATATATTGCAGCTACGTCATTGGGCCTCATTACGAGGTCAAACACTTAGCAGGACAGTTCGGGGAATGATGTACTATCGGCGGGCTCTTAAGCTCCAGGCTTTTCTTGATATGGCTAATGAAAAGGAGATACTTGATGGATATAAAGCTATTACTGTTCCATCCGAGGAAGATAAAAAGAGTCACAGATCACTGTACGCCAGTTTAGAGGCTGTTGCTGACATGAAGTTCACATATATCGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGTGGAGACCGCCATGCAACAGACATCCTGAATTTGATGGTTAACAATCCCTCGCTCCGTGTGGCATATATTGATGAGCTTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTACTACTCTGTATTGGTCAAAGCTGTGGACAATCATGACCAGGAAATATATCGAATAAAACTACCAGGTCCAGCGAAGTTAGGAGAAGGGAAACCTGAAAATCAAAACCATGCAATTATTTTTACCAGAGGAGAAGCTCTTCAGACTATCGACATGAACCAGGATAATTACTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTGGAGGAATTTAACGAGGATCATGGAGTGCGCCGACCTACTATATTAGGTGTTCGTGAGCATATCTTCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAGAGAGTTCTTGCAAGACCCCTGAAGGTACGATTTCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATTACCCGTGGAGGAATTAGTAAGGCTTCTCGTGGCATCCATTTGAGCGAGGATATTTTTGCCGGATTCAACTCAACACTACGGCGTGGGAATATTACTCATCATGAATACATCCAAGTTGGAAAGGGTAGAGATGTTGGGATGAATCAGATCTCGCTTTTTGAAGCAAAGGTGGCTTGCGGTAATGGAGAGCAAATACTAAGCAGAGACGTCTACAGGCTGGGGCATCGTTTTGACTTTTTCCGCATGTTATCGTTTTATTTTACGACCGTTGGATTTTATATCAGCTCAATGATTGTGGTCTTTACGACTTATGCTTTCCTATACGGCAAGCTGTACCTGTCATTAAGTGGATTTGAGGCTGCAATAGTCAAGTTTGCTAGGAGAAAGGGAGACGATACATTAAAGGCGGCTATAGCTTCACAATCACTTGTCCAAATAGGACTTCTAATGACTTTACCCATGTTCATGGAAATTGGACTGGAGAGAGGGTTCAGAACTGCTGTAGGCGACTTAATAATAATGCAGTTGCAACTCGCACCTGTTTTCTTCACTTTCTCGCTTGGAACGAAAATACACTATTTTGGACGCACTCTCCTGCATGGAGGGGCAAAGTATAGAGCAACTGGGCGTGGATTTGTTGTTCGCCATGAAAAGTTTGCAGACAATTACAGGTTGTACTCTAGGAGTCACTTCGTCAAAGGGATTGAGCTCACAATGTTGCTCATTTGCTATAAGATTTATGGAGCAGCAACACCTGACTCAGCAACATACGCTCTTCTCTCATGGTCAATGTGGTTTATGGTTTGTTCTTGGTTGTTTGCTCCTTTCCTTTTCAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGACTGGGATGATTGGAATAAATGGATTAGTAATCGAGGTGGTATTGGTGTTCCTTCAACAAAGAGTTGGGAGTCATGGTGGGCTGAGGAACAGGAGCATCTGCAGCACACCGGCTTTGTGGGGCGGATTTGTGAGATTCTTCTTTCCTTACGTTTCTTTATCTACCAGTATGGGATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGAGCATCTTGGTTTATGCTCTGTCCTGGATAGTAATAGTAGCTGTCATGGTTATCTTGAAGATTGTGTCCATGGGCAGAAAGAAGTTCAGCGCAGATTTCCAGTTGATGTTCCGTCTTCTCAAATTGTTTCTGTTTATTGGAGCCGTTGTTGCCCTGGCCTTAATGTTTACTTTGCTTAGCCTCACTGTTGGAGACATCTTTGCTAGTCTCCTTGCCTTTTTGCCAACAGCATGGGCAATTATAATGATAGCACAAGCATGCAGGCCAATCGTGAAGGGCATTGGAATGTGGGGGTCAGTTAAAGCTTTAGCTAGGGGCTATGAATACCTGATGGCAGTGGTTATATTTACGCCAGTGGCCATATTGGCATGGTTCCCATTTGTTTCAGAATTCCAAACCAGGCTGCTATTCAACCAAGCATTCAGCAGAGGACTTCAAATCCAGCGTATTCTGGCCGGTGGCAAGAAACATAAGCAAAACTAA 5757 0.4273 MSSLEPAPSTLTRRPSRSAAMTTVSMEVFDNDVVVPSSLATISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNATSLAARTKKTDAREIQVYYQQYYENYVKALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGAFQPIMQLEEIKAAVSALFNTRGLNWPSAFEQTRQRTGDLDLLDWLRAMFGFQRDNVRNQREHLILLLANNHIRLHPKPEPLNKLDDRAVNSVMTDLFKNYKTWCKFLGRKHSLRLPQGQQEIQQRKLLYMGLYLLIWGEASNLRFMPECICYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVISPIYKVIHTEAEKSRNGMAPHSAWCNYDDLNEYFWTPDCFSLGWPMRDDGEFFKSTFNLTQGRKGAPAKSARTGKSNYVETRSFWNLFRTFDRLWTFYILGLQAMFIIAWGNISVLEIFQKDVLYKLSSIFITAAFLRLLQSILDLSLNFPGFHRWKFTDVLRNVLKVIVSLLWVIVLQIFYVHSFDGAPEFIRKLLSFVHQMKGIPPYYVLAVAVYLIPNVLAALLFLFPMLRRWIENSDWHIFRLLLWWQQPRIYVGRGMHESQLSLLKYTLFWVLLLAAKFSFSFFVQIKPLVKPTKDIMSIRHVDYNWHQFFPQAQNNYSAVAALWVPVLMVYFMDTQIWYAIFSTVCGGVLGAFDRLGEIRTLSMLRSRFQSLPGAFNTYLVPTDRRKKKKFSLSKRFAEISANRRSEAAKFAQLWNEIICSYREEDIISDREMDLLLVPYSSDPSLKIIQWPPFMLASKIPIALDMAAQFRGRDSDLWKRICGDEYMKCAVLECYESFQQILNTLVIGEAEKRTISIILKEVENSISKNTLLTNFRMGFLPSLCKKFVELVEILKAADSSKRNTVVVLLQDMLEVFTRDMMVNDSSELAELNLSSKDTGRQLFAGTDAKPTVLFPPVVTSQWEEQIRRLHLLLTVKESAIEVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLNCKKDSEVWERDENILQLRHWASLRGQTLSRTVRGMMYYRRALKLQAFLDMANEKEILDGYKAITVPSEEDKKSHRSLYASLEAVADMKFTYIATCQNYGNQKRSGDRHATDILNLMVNNPSLRVAYIDELEEREGGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASRGIHLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGMNQISLFEAKVACGNGEQILSRDVYRLGHRFDFFRMLSFYFTTVGFYISSMIVVFTTYAFLYGKLYLSLSGFEAAIVKFARRKGDDTLKAAIASQSLVQIGLLMTLPMFMEIGLERGFRTAVGDLIIMQLQLAPVFFTFSLGTKIHYFGRTLLHGGAKYRATGRGFVVRHEKFADNYRLYSRSHFVKGIELTMLLICYKIYGAATPDSATYALLSWSMWFMVCSWLFAPFLFNPSGFEWQKIVEDWDDWNKWISNRGGIGVPSTKSWESWWAEEQEHLQHTGFVGRICEILLSLRFFIYQYGIVYHLNVARGDKSILVYALSWIVIVAVMVILKIVSMGRKKFSADFQLMFRLLKLFLFIGAVVALALMFTLLSLTVGDIFASLLAFLPTAWAIIMIAQACRPIVKGIGMWGSVKALARGYEYLMAVVIFTPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHKQN* 1919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3348 1918 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 4 1915 - -
Mtr3g3348 1918 SMART FKS1_dom1_2 321 437 IPR026899 -
Mtr3g3348 1918 Coils Coil 1314 1334 - -
Mtr3g3348 1918 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 921 934 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mtr3g3348 1918 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 323 434 IPR026899 -
Mtr3g3348 1918 Pfam Vta1 like 42 169 IPR039431 -
Mtr3g3348 1918 Pfam 1,3-beta-glucan synthase component 1038 1731 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Mtr3g3348 1918 Gene3D - 28 189 IPR023175 -
Mtr3g3348 1918 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 4 1915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3348 Mtr-Chr3 47415010 47431156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3348 5 1918 Glycosyltransferase AT1G05570 60.421 0.0 2409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3348 K11000 - gmx:100777245 3457.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3348 3 47415010 47431156 Mtr3g3348 3 47415010 47431156 ECH
Mtr3g3348 3 47415010 47431156 Mtr8g3280 8 43285604 43301566 PCT