Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3277 ATGGTGCGGTTATTAGGGTTCGCTCGCGGTTACGCAGATGAACCCAGGGAAATTGAGTCAAAGTCAAACCTGACTAGTGATTCTAGTGAAAATGGATGGCTTATTAGGTTCTTTGATTCATCGTTTTTTTGCGAATGGATTGCTGTTAGTTACTTGTACAAGCATGATCATGCCGGGGTGCGTGATTATCTTTGTAATAGAATGTATACTCTTCCCTTGACAGGGCTTGAGAGTTATTTGTTTCAGATTTGTTATATGATGATACATAAGCCTAGTCCGTCGTTGGATAAGTTTGTCATAGATATGTGTTCCAAGTCGCTTAAGATTGCATTGAAAGTGCATTGGTTTTTGATGGCGGAGTTGGAGGATTCTGATGATAATGACGGGATTAGTAGGATTCAGGAGAAGTGTCAGATTGCAGCTACTTTGATGGGTGAGTGGCCGCCTTTGATACGACCTCATACTGAACCTCCGAGTGCTGGAGGTAAAAGTCAAGTTTTGAATAGGTTGCTTTCGAGTAAAAATCGTTTATTGTCTTTGACAACCTCACCGCCAAAGTCTTTGTCATTTTCATCTTCACCGGGAAATAATTTGCAAGAGGATGGAAATCCACTGTCTCCTGATGAGAATAGGATATTTAAAAAGTTTATGCCAAGTCCTAAGGTTAGAGATGCTTTGCTTTTTAGAAAGTCAGCGGATAAAGAGGACGGTGATTCTGAAAAGGATGGGTTTTTCAAGAGACTTTTAAGAGATAGCAAAGGTGATGATGAGCTCGGCCAAAAAATTCGTGATGCATTTCATTTTCGGAAGTCGTCCGAGAAAGATGCCTTAGACTCTGAGAAAGAGAATTTCTTTAAAAGGTTCTTAAGAGACAGTAGGGACAGTACTAGAGGCGATGAGGAAGAATCTGAAAAGGATGGTTTCTTTCAAAGGATCTTAAGAGAAAGTAGAAGCGAAGATGAGGATGTGTCCTCAAGTTCAGAAGGATTTTTTAAGAAGTTATTTCGGGATAGTAAGAATGATTCTGAGGACAAAACGGATTCAAAAACAGTGGAAGATGAAGAGAAAGATGGACTTTTCCGAAAGTTTTTCCGGGAGAAATTCGAAGATAAGAAAGATGCGCGTGACAGAAATGACAATAGAAATGTTCCTAATTCTGAAGAGAAATGTCCAAAGCCTGATGAAGAGGATGAAAAAGATGGGTTTTTCCGGAAATTCTTCAGGGATAAATTTGAGGACAAGAAAGACACAAAAGATAAAATTGAAGAAGGTACTGCCAACGGCGAGGAAGAAGAGCCTTCTGAACTTTCCTTGTTCAAAAGGCTATTCCGTGTGCACCCTGAAGACGACAAAAGTAGTCCAGTCAATGAAAATAGCAATAACGGTGGTTTGATTCAAAGTAGTCCAGGTACAGAGAATTTTTTCCGTAAATTGTTCAAAGACCGTGACCGTTCAATTGAAGATTCAGAGCTGCTGGGGTCAAAGAGGCAGAAAGAGAAGCATCCTGGGTCCCCAATGCCGCAAAGTGAAAAATCGAGCACAAAGCCCCCATTACCGATCAATCCATCTCAGTTCCGTAAAGGGGCTTACCATGACTCGTTGGAGTTTGTTCAGTCATTATGTGACACATCTTATGGGTTAGTGGATGTATTTCCAACTGAAGATCGCAAGAGTGCTCTTCAAGAGTCACTTAGAGAGATCAATGTACATGTAACAGAGGTTCAGAATACTGGAGGAGTCTGTTTCCCACTGGGAAAGGGCATGTATCGCGTGCTTCATATGCCAGTAGATGAAGCTGTTCTCTTGAATTCTCGGGAGAAGGCACCTTACATGATATGCATCGAAGTTTTGAGATGTGAAATGCCAAGTAATTTCAAGGAGACATCCAGTTCTCAGAAGCTTTCTCAAGGTGGAATTCCTTTGGCAAATGGAGACGCTTTCTTGCAAAAACCACCCCCTTGGGCTTATCCATTATGGACAGCACAAGAGGTGTACCGTAATAGCAATGATAGGATGTCTAGATCGACTGCTCAGGCAATTGACCAGGCAATGACTCATGTATCTGAGCCAAAATTTGTTAGCCTGAATCTGTCAGTGGAAACACGGTATAATGAGGGTGTATATGAAGCATCAGGAGCAGAACATGACAGTGATCTGGAATGGGTACGAGTAGTATTGACAGCTGATCCTGGGGTTAGGTTGGAAGATATTGAGGATAAAGCACCATCTCGGAAAAAGGAACATCGCCGTGTTCCAAGTACAGTGGCAATAGAAGAAGTGAAGGCTGCGGCAGCAAAAGGAGAAGCGCCTCTTGGACTCCCTTTGAAAGGTGCTGGCCAAGACTCATCAGATTCACAACTGAGGGCTAATGGAATTACCCCCAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGATAGAGTACGCAAGGCTTCTATATACGGGAAGTTACCTGGTTGGGATTTGCGGTCGATTATTGTAAAGAGTGGAGATGATTGCAGGCAGGAGCATCTGGCTGTTCAACTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTCTACCGCTTTGGCTGCGCCCTTATGAAGTTTTGTGTACTTCTTCTTATACCGCTCTCATTGAAACAATACCAGATACGGCTTCTCTACACTCAATCAAAAGTAGATATCCCAACATTTCGAGTTTACGTGAATTCTTCGATGCTAAATATGAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTCGAGAGTATGGCAGGATATTCCCTGGTGTGCTACTTTCTGCAGGTGAAAGATAGGCATAACGGGAACCTCCTATTGGACGAAGAAGGTCATATCATACATATTGATTTTGGCTTCATGCTATCCAATTCACCTGGTGGGGTTAATTTTGAAAGTGCACCTTTTAAATTAACACGTGAGCTTCTTGAGGTTATGGATTCTGACGCTGAGGGTGTGCCAAGCGAGTTCTTTGATTATTTTAAGGTTTTATGCATTCAAGGCTTCCTCACTTGTCGCAAGCATGCTGAGCGTATTATTCTTCTTGTTGAGATGTTGCAGGATTCGGGTTTTCCCTGCTTTAAAGGTGGTATACGTACGATACAGAACTTACGAAAGCGATTCCATCTCAGTTTAACAGAAGAGCAATGTGTCTCCTTGGTTCTTTCTCTTATTAGCAGTAGCCTTGATGCTTGGAGAACACGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATATTGTGA 3270 0.4196 MVRLLGFARGYADEPREIESKSNLTSDSSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLTGLESYLFQICYMMIHKPSPSLDKFVIDMCSKSLKIALKVHWFLMAELEDSDDNDGISRIQEKCQIAATLMGEWPPLIRPHTEPPSAGGKSQVLNRLLSSKNRLLSLTTSPPKSLSFSSSPGNNLQEDGNPLSPDENRIFKKFMPSPKVRDALLFRKSADKEDGDSEKDGFFKRLLRDSKGDDELGQKIRDAFHFRKSSEKDALDSEKENFFKRFLRDSRDSTRGDEEESEKDGFFQRILRESRSEDEDVSSSSEGFFKKLFRDSKNDSEDKTDSKTVEDEEKDGLFRKFFREKFEDKKDARDRNDNRNVPNSEEKCPKPDEEDEKDGFFRKFFRDKFEDKKDTKDKIEEGTANGEEEEPSELSLFKRLFRVHPEDDKSSPVNENSNNGGLIQSSPGTENFFRKLFKDRDRSIEDSELLGSKRQKEKHPGSPMPQSEKSSTKPPLPINPSQFRKGAYHDSLEFVQSLCDTSYGLVDVFPTEDRKSALQESLREINVHVTEVQNTGGVCFPLGKGMYRVLHMPVDEAVLLNSREKAPYMICIEVLRCEMPSNFKETSSSQKLSQGGIPLANGDAFLQKPPPWAYPLWTAQEVYRNSNDRMSRSTAQAIDQAMTHVSEPKFVSLNLSVETRYNEGVYEASGAEHDSDLEWVRVVLTADPGVRLEDIEDKAPSRKKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDSQLRANGITPKASDALSGELWEAKKDRVRKASIYGKLPGWDLRSIIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFDAKYEENSPSFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGIRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 486 524 - -
Mtr8g3277 1089 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Mtr8g3277 1089 CDD PI4Kc_III_beta 797 1089 - -
Mtr8g3277 1089 Pfam Phosphatidylinositol 3- and 4-kinase 828 1035 IPR000403 -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 181 209 - -
Mtr8g3277 1089 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 806 1074 IPR000403 -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 181 204 - -
Mtr8g3277 1089 PANTHER BNAA02G34040D PROTEIN 260 333 - -
Mtr8g3277 1089 PANTHER BNAA02G34040D PROTEIN 326 1089 - -
Mtr8g3277 1089 PANTHER BNAA02G34040D PROTEIN 6 256 - -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 486 505 - -
Mtr8g3277 1089 Gene3D - 48 140 IPR042236 -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 414 453 - -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 506 520 - -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 771 792 - -
Mtr8g3277 1089 PANTHER PHOSPHATIDYLINOSITOL KINASE 326 1089 IPR015433 GO:0046854|GO:0048015
Mtr8g3277 1089 PANTHER PHOSPHATIDYLINOSITOL KINASE 6 256 IPR015433 GO:0046854|GO:0048015
Mtr8g3277 1089 PANTHER PHOSPHATIDYLINOSITOL KINASE 260 333 IPR015433 GO:0046854|GO:0048015
Mtr8g3277 1089 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 831 845 IPR018936 GO:0016301
Mtr8g3277 1089 Gene3D - 886 1087 IPR036940 GO:0016301
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 454 471 - -
Mtr8g3277 1089 SUPERFAMILY Protein kinase-like (PK-like) 559 1082 IPR011009 -
Mtr8g3277 1089 SMART pi3k_hr1_6 828 1087 IPR000403 -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 372 401 - -
Mtr8g3277 1089 Gene3D - 696 881 - -
Mtr8g3277 1089 MobiDBLite consensus disorder prediction 414 471 - -
Mtr8g3277 1089 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3277 Mtr-Chr8 43249838 43261261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3277 1 1088 Lipid Metabolism Gene Families AT5G09350 70.160 0.0 1536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3277 K19801 - gmx:100778394 1778.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3277 8 43249838 43261261 Mtr8g3277 8 43249838 43261261 ECH
Mtr8g3277 8 43249838 43261261 Mtr3g3343 3 47378826 47385609 PCT