Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3343 ATGGTGAGTTTCTTAGGATTGACTCATGGAGAGGGCGAACAACCCCGAGAAATCACGTCGAGGTCTAATCGGACAAGTGAATCCAGTGAAAATGGATGGCTTATTAGATTTTTTGATTCTTCATTCTTCTGTGAGTGGATTGCTGTTAGTTACTTGTACAAGCATGATCATGCGGGAGTGCGCAATTATCTTTGTAATCGAATGTACACACTTCCTTTGCAAGGAATTGAGGGTTATTTGTTTCAAGTGTGTTACATGACGATATATAAACCGAATCAATCGTTGGATAAGTTTGTTATAGATGTATGCTCGAAGTCACTTAAGATTGCTTTGAAGGTGCATTGGTTTTTGTTGGCTGAGCTTGAGGATGACAATGATGGGATTAGTAGGATTCAAGAGAAGTGTCAGATTGCTGCCACATTGATGGGGGAGTGGCCACCCTTGATATGGCCTCAAAGTGCACCGACAAGCCCTGCAGGAAAGAGCCAAGTTTTGAATAGGATATTGTCATCAAAACATAGATTGTTGTCTTTAACATCTTCATCGCCTACACAGAGATCTTTGTCGTTCTTGCCTTCTTTGGGAAACAATTTGCAAGATGATGGTAGTCCGCAGTCTCCTAAACAAGTCGTGAGGTGCAGTTTTTTTTTGGTTATTGTAAAGAGTGGGGACGATTGTAGGCAGGAGCATCTGGCAGTTCAACTTATTTCACATTTCTATGATATTTTCCAAGAAGCTGGACTTCCTCTCTGGCTACGCCCGTATGAAGTGTTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCAAGATACGGCTTCTCTACATTCTATAAAGAGTAGATATCTCAACATTTCAAGTTTACGGGAATTCTTTATTGCCAAGTATGAAGAAGATTCTCCAAGTTTTAAACTGGCTCAGACCAATTTACTTTATAATATTGTGCATAATGGGAACCTCTTATTGGATGAAGAAGGCCATATCATACATATCGATTTTGGCTTCATGCTTTCCAATTCGCCTGGTGGTGTTAATTTTGAAAATGCACCTTTCAAATTATCTCGGGAGCTTCTTGAAGTTATGGACTCTGATGTTGAGGGACTTCCGAGCGAAATCTTTGATTTTATTAATCTAAATTGCCGTAAGCATGCTGAGCGCATTATTCTTCTTGTTGAGATGTTGCAGGACTCTGGTTTCCCCTGCTTTAAATGTGGTCCACGGACGATACAGAACCTAAGAAAGCGATTCCATCTCAGTTTAACTGAAGAGCAATGTGTATCTTTGGTTCTTTCACTTATTAGCAGCAGCCTGGATGCATGGCGAACAAGGCAGTATGATTATTACCAGAAGGTTTTGAATGGAATATTTTAA 1374 0.3988 MVSFLGLTHGEGEQPREITSRSNRTSESSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRNYLCNRMYTLPLQGIEGYLFQVCYMTIYKPNQSLDKFVIDVCSKSLKIALKVHWFLLAELEDDNDGISRIQEKCQIAATLMGEWPPLIWPQSAPTSPAGKSQVLNRILSSKHRLLSLTSSSPTQRSLSFLPSLGNNLQDDGSPQSPKQVVRCSFFLVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIQDTASLHSIKSRYLNISSLREFFIAKYEEDSPSFKLAQTNLLYNIVHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFENAPFKLSRELLEVMDSDVEGLPSEIFDFINLNCRKHAERIILLVEMLQDSGFPCFKCGPRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQKVLNGIF* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3343 457 Pfam Phosphatidylinositol 3- and 4-kinase 317 402 IPR000403 -
Mtr3g3343 457 Pfam Phosphatidylinositol 3- and 4-kinase 218 305 IPR000403 -
Mtr3g3343 457 PANTHER BNAA02G34040D PROTEIN 11 204 - -
Mtr3g3343 457 PANTHER PHOSPHATIDYLINOSITOL KINASE 11 204 IPR015433 GO:0046854|GO:0048015
Mtr3g3343 457 SUPERFAMILY Protein kinase-like (PK-like) 207 451 IPR011009 -
Mtr3g3343 457 Gene3D - 154 271 - -
Mtr3g3343 457 SUPERFAMILY ARM repeat 54 133 IPR016024 -
Mtr3g3343 457 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 194 442 IPR000403 -
Mtr3g3343 457 MobiDBLite consensus disorder prediction 1 24 - -
Mtr3g3343 457 PANTHER PHOSPHATIDYLINOSITOL KINASE 218 456 IPR015433 GO:0046854|GO:0048015
Mtr3g3343 457 Gene3D - 316 455 IPR036940 GO:0016301
Mtr3g3343 457 PANTHER BNAA02G34040D PROTEIN 218 456 - -
Mtr3g3343 457 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 220 234 IPR018936 GO:0016301
Mtr3g3343 457 ProSiteProfiles PIK helical domain profile. 1 143 IPR001263 -
Mtr3g3343 457 SMART pi3k_hr1_6 217 455 IPR000403 -
Mtr3g3343 457 Gene3D - 48 142 IPR042236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3343 Mtr-Chr3 47378826 47385609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3343 218 456 Lipid Metabolism Gene Families AT5G09350 81.154 2.50e-131 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3343 K19801 - gmx:100781715 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3343 3 47378826 47385609 Mtr3g3343 3 47378826 47385609 ECH
Mtr8g3277 8 43249838 43261261 Mtr3g3343 3 47378826 47385609 PCT