LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g3174	ATGTTGTCGACATATCCAATTCTTAACGATCAACCTATTGATCAATTGAATGTTACTGATGTGAATGATGAGGTTAAGAGTACAAAACTAGTTACAAAAGGTTTAAAGGAAGATTTGATTAACTCTTTGGATGAAGCCGTGACCATTGAAAGCGTGGATGCTGAGGTTTCCAAGAAGGATGAGGTTGATGGTTTCATTGGAAATACTGTTGAGCTAAAGGATGCAGATAGAGAGACTGTAGTTGATGCAGTAGTTGACACAGGTGTAATGAAAAGTTCCGAAAGTGTTGAATCAGATGAAGAGGGTAACAGTGCAGTAGTTCATCCAACTGATACAGAAAATGATGAAAAGATTCCAGATGTTGTGAACAATGACAGTGGAAAGAGTGGTAAGCAATATGGTATTACAAAGCCGGTTGACAATGATAATAGTGCAATGGTGGAACAAGAAGTGGAACAAATGGATTTATCAGCTGGTGCGGATTCTGCAAATGTGGCAGGGGACCTAATTCATTCTTCTACTAGAGGTACCCCTGTTACAGTCACCGAGAGTGTCTTAACAGAAGTAGTAGTCAGCGGTCAGGAGGATTCATGTAGTGCAAAGCCACGGAATGGTCATGGTCAGGATTTCGTAACCAAGCAGGAGGATAAGGAGTCAAATGTGAGGCTGAGTAATGAGGAGTCAAAGCCCGAGCTGGAGTGTGACTTAAAGCCACCTTGTGAGCATCTCATGCCCAACTCTTTGCTTCTTGAAAATCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCACAAGTAAGATTTGATTCTGTTTCTAGTAATTTTGTGTCAATTAATCAAAAGAATGAAATAAAGGATACTATAATTGCTAATAATGTCAAATTAGAACAAGAAATTGTTAGGTCAGAGATGGTGGAAGAACCATCATCGAAAATTGATGTCCCTGTTAGCGATGAATCACATTCAATGGATGTTGAAGAGCTAGACGAGAAAAAGGCATCTGCTGAGGAAAATGTCAGTGACAACAGAAGTCCAGACATGAACAAGACCAATATCAGTGAAGATGTTGGTTATCCAGAAAAGTTAAACTTGGATGGAAGTTCTGGTGATGATTCCATGGAAGAGGATTTTCCAGAGGAGGGCAAGCAATTTGATTCCAATTTTAATGTTGATGAACTTAGAGAAAAGGGGGAAAGTGTTGAATTGCCTGTTGTGAATGAGGAGCGTGATGCTATTGCGGTGGGAGATGGTCTATCCTCAGAAGAAGGTGGTACCCAGCACAATAATAATATTCCTTCTGTTTCTCTTGTCAAGAAACAAAAATTTCAGGATCAAACATCAGTTGAGAATAATGAGCCTCCAAAACGACAAAAAAGGTGGAAATCTGAAACAGTTAAAGGTTCAGATTCACAAATGTCTACTGTCAGACCTGCTACTGCACCAAAGGGTGAGCCAATTGCTTTGAAGCGCAATTTGTCTTGGTCTGATTCCTCAGCAATTGATGATGCGCCCAAAGAACGCATCGTTCCACCATCACAAAGGCCCCCAACTAATTCCCTCAGGATTGATCGTTTCATCCGACCTTTTACCTTAAAAGCAGTGCAAGAACTTCTTGGTAAATCTGGGAATATCATCAGTTTTTGGATGGACCAAATAAAAACCCATTGCTACGTCAGTTACTCAACTGTTGAAGAAGCCACTGAGACCCGAGATGCTGTTTATAATCTTCAATGGCCTCCAAAGGGTGGACGCCTTTTAGTTGCTGAGTATGTTGAACCCCAAGAAGTGAGAATGAAGCTAGAACCTCCTCCTCCTGTTGCCTTTGCCAACAATGATTCAACAGTTCCTCCTGTAGCAACTACCTCACTGCCAGAGCCTTTACCCTATCAGCACAAGGAGCAACCTCCCATTCCTGTCACACTTCCTCCTCCACCGCCTTTGTCAAAGCTCCCGCCAGCAACTAGAGAACAACTTCCACCACCACCACCTTTGTCAAAGCTCCCACCAGCAGCTAGGGAACATCCTCCACCTCCACCACCTTCGGCAAAGCTCCCGCCAGCAGCTAGAGAACGGCTTCCACTGCCGCCACCATTGTCAAAGCTCCCACCAGCTGCTAGAGAACGGCTTCCACCACCATCACCCCTTCCAGAGAAAGTTGACCGACCTATTCTTACAATCGATGATATCTTTCGCAAAACCATATCAACTCCTCAAATCTACTATTCACCGCTATCCGAAGAGCAAGTTGCAGCAAAACTGGCGGCACTGTGCAGAAGTATTAAGCAGTAG	2286	0.4313	MLSTYPILNDQPIDQLNVTDVNDEVKSTKLVTKGLKEDLINSLDEAVTIESVDAEVSKKDEVDGFIGNTVELKDADRETVVDAVVDTGVMKSSESVESDEEGNSAVVHPTDTENDEKIPDVVNNDSGKSGKQYGITKPVDNDNSAMVEQEVEQMDLSAGADSANVAGDLIHSSTRGTPVTVTESVLTEVVVSGQEDSCSAKPRNGHGQDFVTKQEDKESNVRLSNEESKPELECDLKPPCEHLMPNSLLLENQVSEVNPSLGSQVRFDSVSSNFVSINQKNEIKDTIIANNVKLEQEIVRSEMVEEPSSKIDVPVSDESHSMDVEELDEKKASAEENVSDNRSPDMNKTNISEDVGYPEKLNLDGSSGDDSMEEDFPEEGKQFDSNFNVDELREKGESVELPVVNEERDAIAVGDGLSSEEGGTQHNNNIPSVSLVKKQKFQDQTSVENNEPPKRQKRWKSETVKGSDSQMSTVRPATAPKGEPIALKRNLSWSDSSAIDDAPKERIVPPSQRPPTNSLRIDRFIRPFTLKAVQELLGKSGNIISFWMDQIKTHCYVSYSTVEEATETRDAVYNLQWPPKGGRLLVAEYVEPQEVRMKLEPPPPVAFANNDSTVPPVATTSLPEPLPYQHKEQPPIPVTLPPPPPLSKLPPATREQLPPPPPLSKLPPAAREHPPPPPPSAKLPPAARERLPLPPPLSKLPPAARERLPPPSPLPEKVDRPILTIDDIFRKTISTPQIYYSPLSEEQVAAKLAALCRSIKQ*	762

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	601	719	-	-
	Mtr8g3174	761	Pfam	RNSP1-SAP18 binding (RSB) motif	719	754	IPR032552	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	438	494	-	-
	Mtr8g3174	761	CDD	RRM_ACINU	516	600	IPR034257	-
	Mtr8g3174	761	PANTHER	SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN	1	666	-	-
	Mtr8g3174	761	PANTHER	SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN	679	758	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	125	140	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	450	464	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	304	387	-	-
	Mtr8g3174	761	PANTHER	SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN	679	758	-	-
	Mtr8g3174	761	PANTHER	SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN	1	666	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	208	232	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	628	717	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	304	342	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	193	232	-	-
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	91	140	-	-
	Mtr8g3174	761	SUPERFAMILY	RNA-binding domain, RBD	509	598	IPR035979	GO:0003676
	Mtr8g3174	761	MobiDBLite	consensus disorder prediction	104	122	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g3174	Mtr-Chr8	42298046	42303140	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g3174	K12875		-	gmx:100786288	750.355

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr8g3174	8	42298046	42303140	Mtr8g3174	8	42298046	42303140	ECH
	Mtr8g3174	8	42298046	42303140	Mtr3g2937	3	43250869	43254795	ECH