Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3072 ATGGCATCAACCATCATTGCAATGACCATGATCAACGCAAAGTCCTTGAACACTACTAGTTCACCAAAGTTCCACAACCCAACTAAGCTCATTACAAACCCCACTTCCCTCATTTCCCTCAAGAACCTTCTTCCAAAGAAAATTCCCACAACAGAAAACATTAAACTATCAACATCCATAGCAGGAACAGCACTAGCAGGGGCAATATTCTCAACACTCTCAACCTGTGATGCAGCTTTTGCAGCACAACAAATAGCTGAAATAGCAGAAGGATCATCAGACAACCGTGGTTTAGCACTTTTGTTACCATTAATTCCAGCCATAGCTTGGGTTCTGTACAACATTCTTCAACCAGCACTTAACCAAATCAACCGTATGCGTAACGATAAAGGAGTTATAATTGGTTTAGGTCTTGGGGGTGGGTTAGCAGCTTCAGGGTTTGTATCAACACAAGATGCAATTGCTAGTGAAATGACTGCAATTGCTGAAGCTGCTGGTAGTGATAACAGGGGTCAGCTTCTGTTGTTTGTGGTAACACCAGCTATTCTTTGGGTTCTTTATAATATTTTGCAGCCTGCTCTTAACCAAATCAACAGAATGAGACAGTGA 609 0.4171 MASTIIAMTMINAKSLNTTSSPKFHNPTKLITNPTSLISLKNLLPKKIPTTENIKLSTSIAGTALAGAIFSTLSTCDAAFAAQQIAEIAEGSSDNRGLALLLPLIPAIAWVLYNILQPALNQINRMRNDKGVIIGLGLGGGLAASGFVSTQDAIASEMTAIAEAAGSDNRGQLLLFVVTPAILWVLYNILQPALNQINRMRQ* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3072 202 Pfam Photosystem II protein Y (PsbY) 168 200 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Mtr8g3072 202 Pfam Photosystem II protein Y (PsbY) 94 126 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Mtr8g3072 202 Hamap Photosystem II protein Y [psbY]. 94 128 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Mtr8g3072 202 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 202 - -
Mtr8g3072 202 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 202 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3072 Mtr-Chr8 41354267 41355093 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3072 K02723 - zju:107428525 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3072 8 41354267 41355093 Mtr8g3072 8 41354267 41355093 ECH
Mtr8g3072 8 41354267 41355093 Mtr3g2853 3 42464238 42465137 PCT