Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2812 ATGGATCCAGACGTGTTGGCAAAGGCATTTGTGGAGCACTACTACACAACATTCGATAACAACCGTGGTGGACTCGCCACTCTTTACCAAGAAGGTTCCATGCTCACTTTCGAAGGTCAGAAGATTCAAGGTTCCCCCAACATCGTTGCCAAACTTACTTCCCTTCCTTTCCAGCAGTGTCATCACTCCATCACCACCGTCGATTGTCAACCTTCCGGTGCCAACGGCGGCATGCTTGTCTTCGTCAGCGGTAATCTTCAACTCGCTGGTGAACAACACGCCCTCAAATTCAGCCAGATGTTCCATTTGATGCCAACACCGCAAGGAAGCTATTATGTGATGAATGACATATTTCGTTTGAACTATGCCTAA 372 0.4785 MDPDVLAKAFVEHYYTTFDNNRGGLATLYQEGSMLTFEGQKIQGSPNIVAKLTSLPFQQCHHSITTVDCQPSGANGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSYYVMNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2812 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Mtr8g2812 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Mtr8g2812 123 CDD NTF2 2 122 IPR018222 -
Mtr8g2812 123 PANTHER NUCLEAR TRANSPORT FACTOR 2B 1 123 - -
Mtr8g2812 123 SUPERFAMILY NTF2-like 4 121 IPR032710 -
Mtr8g2812 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Mtr8g2812 123 Gene3D - 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2812 Mtr-Chr8 38818433 38821159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2812 - - pvy:116131274 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2812 8 38818433 38821159 Mtr8g2812 8 38818433 38821159 ECH
Mtr3g2788 3 41885385 41887514 Mtr8g2812 8 38818433 38821159 PCT