Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2788 ATGGATCCAAACGCATTGTCAAAGGCATTCGTGGAACACTACTACACCACCTTCGACACCAACCGTCCCAATCTCGCCGCTCTCTATCAAGATGGTTCCATGCTCACCTTCGAAGGTCAGCAAATTATGGGATCTCAGAATATCGTCACTAAACTCACTTCTCTCCCTTTCCAGCAGTGCCATCACTCCATCACCACCGTTGATTGTCAACCTTCTGGCGCTAACGGCGGCATGCTCGTCTTTGTCAGTGGTAATCTTCAGCTCGCCGGCGAACAACACGCCCTCAAATTCAGTCAGATGTTCCATTTGATACCAACACCGCAAGGAAGCTATTATGTGTGGAATGACATATTCCGTTTGAACTATGCATGA 372 0.4812 MDPNALSKAFVEHYYTTFDTNRPNLAALYQDGSMLTFEGQQIMGSQNIVTKLTSLPFQQCHHSITTVDCQPSGANGGMLVFVSGNLQLAGEQHALKFSQMFHLIPTPQGSYYVWNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2788 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Mtr3g2788 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Mtr3g2788 123 PANTHER NUCLEAR TRANSPORT FACTOR 2B 1 123 - -
Mtr3g2788 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Mtr3g2788 123 CDD NTF2 2 122 IPR018222 -
Mtr3g2788 123 Gene3D - 1 123 - -
Mtr3g2788 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2788 Mtr-Chr3 41885385 41887514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2788 - - gmx:100777334 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2788 3 41885385 41887514 Mtr3g2788 3 41885385 41887514 ECH
Mtr3g2788 3 41885385 41887514 Mtr8g2812 8 38818433 38821159 PCT