Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2803 ATGAGAACAAGAACAGGGGCTTGTTATCCAGAACCTGGAATAGTGACAAAGATGTGTTCATTTGGGAAGAGAAAACCCAGAGACACTCTTTTTTGTGCAAAGAGGCATAAGAAGTGTTCCGAGAAAAAAACCACAACAAATTATGATTTTTTTGAGTCTCTACCAGATGATATTGTTATTTCTATCTTCTGCAGGCTTAGTTCTACAGCCACTTCCCCTTCAGATTTTGTCAGCGTTTTATTAACGTCTAAGAGATTAAAAACATTAGCACTTAATTCTCTTGTGTTATCCAAAGCCTCTCCAAGAACTTTCTCCATTAGAGCCAAAAACTGGTGTGAATCTGCACAGAGATTTCTCAAACAGTGTGCAGAGGCAGGGAATGTTGAAGCATGTTATACTTTAGGCATGATTCGATTCTACTGTTTGCAAAACAGAGGGAGCGGTGCATCGCTTATGGCGAAAGCTGCAATGAACTCACATGCGCGTGCACTCTACTCGCTTGCCGTTATACAATTCAACGGCAGCGGTGGCACCAAAAGCGACAAAGACCTCCGTGCCGGCGTTGCACTCTGCGCTAGAGCCGCTTTTCTCGGCCACATCGACGCACTTCGTGAGCTTGGACACTGTTTACAAGACGGTTACGGTGTCAAGCAGAATATCGCCGAGGGAAGACGTTTTCTCATCCAAGCCAACGCACGTGAACTCGCCGCCGTGTTATCCACCGGCGCCGCCGCACCTGCCGCGCGTCAGTTAGTTAGCACAAATTTTCAGTCACAACTCCGACATGTGGCGGTTTCAGGTTGTCCTCTTTTAAGCGATTTTGGATGTAATGTCCCGGCGCCGGAGCCACATCCGGCGAGTAAATTCATGACGGAGTGGTTTTCTGTTCGAGGCGGTTCTCCTGGACCGGGTTTGAGGCTATGTTCCCATGCCGGATGTGGTAGACCGGAGACGCGGAAGCATGAGTTTCGAAGGTGTTCGGTTTGTGGTGCGGTTAATTATTGCTCACGTGCTTGTCAAGCGCTTGATTGGAAGTTTCGTCATAAGGCTGAGTGTGCTCCGGTGGAACGGTGGCTTGAGGAGGATGGTGAAGACGACGGTGAAGATGACGGTGACCGTGAAGTTATGGTTATGGAAGATAGTTAG 1146 0.4808 MRTRTGACYPEPGIVTKMCSFGKRKPRDTLFCAKRHKKCSEKKTTTNYDFFESLPDDIVISIFCRLSSTATSPSDFVSVLLTSKRLKTLALNSLVLSKASPRTFSIRAKNWCESAQRFLKQCAEAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNIAEGRRFLIQANARELAAVLSTGAAAPAARQLVSTNFQSQLRHVAVSGCPLLSDFGCNVPAPEPHPASKFMTEWFSVRGGSPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLEEDGEDDGEDDGDREVMVMEDS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2803 381 MobiDBLite consensus disorder prediction 359 381 - -
Mtr8g2803 381 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 31 379 - -
Mtr8g2803 381 SUPERFAMILY HCP-like 109 230 - -
Mtr8g2803 381 SUPERFAMILY HIT/MYND zinc finger-like 307 357 - -
Mtr8g2803 381 PANTHER MYND DOMAIN-CONTAINING 31 379 IPR044508 -
Mtr8g2803 381 Pfam MYND finger 312 352 IPR002893 -
Mtr8g2803 381 Gene3D - 304 356 - -
Mtr8g2803 381 SUPERFAMILY F-box domain 37 106 IPR036047 GO:0005515
Mtr8g2803 381 Gene3D Tetratricopeptide repeat domain 91 255 IPR011990 GO:0005515
Mtr8g2803 381 ProSiteProfiles Zinc finger MYND-type profile. 310 352 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2803 Mtr-Chr8 38723847 38725628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2803 - - gmx:100819013 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2803 8 38723847 38725628 Mtr8g2803 8 38723847 38725628 ECH
Mtr3g2799 3 42015560 42017127 Mtr8g2803 8 38723847 38725628 PCT