Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2799 ATGCGAACCAGAACAGGTTTGTGTTATCCTCAAACACTTCAACTATCAAACATGTTTTCAGACACAAACAATAACAAAAGACACAAGAGAATGCCACAAAACACTTCTGATTTCTTTGAACTTTTGCCTGATGACATAGTTCTCTCTATACTTGGAAAACTTAGCTCCACCGCTACTTCTCCTTCAGATTTCATCAGTGTTCTAATCACATGCAAAAGACTAAACGGTTTAAGTCTTAACTCTGTTGTTTTGTCCAAAGCTTCGAACAAAACATTATCAGTCAAAGCTAAAAACTGGTGTGACTCTGCTCACCGTTTTCTCAAACGCTGTGTTGATGCTGGAAACATTGAAGCCTGTTACACTCTTGGAATGATTCGGTTTTACTGTTTGCAAAACAGAGGAAGCGGCGCGTCGTTGATGGCAAAAGCAGCTATGAAATCTCACGCACCGTCTTTGTATTCATTGGCAGTGATTCAGTTCAATGGAAGCGGAGGAACAAAAAACGACAAAGATTTACGCGCCGGTGTTGCTTTATGTGCACGCGCTGCATTTCTCGGTCACATCGACGGTTTACGTGAGCTTGGTCATTGTTTACAAGACGGTTACGGTGTTAAACAGAACGTTATTGAAGGTCGACGGTTTCTAGTCCAAGCAAACGCACGTGAACTCGCTGCCGTTTTATCTAACGGCAATAACAACAAACAACCGTTGCTGACGTGGAGTGTTAACCCGGGTTCAAGCCAACCTCCACAGCTTCGTGTTTTAGCTGGTGCTGGTTCTGTTTCTGGTTCGGGTTGTCCTTTGCTGAGTGATTTTGGTTGTAACGTTCCGGTTCAGGAGACTCACCCAGCGAACCGGTTTATGACAGAGTGGTTCGATATTCGAGGTGGGTTTCCTGGACCGGGTATGAGGTTATGTTCGAATTCTGGTTGTGGAAGACCTGAGACAAGAAAGCATGAGTTTCGAAGATGTTCGGTTTGCGGTGTTGTGAATTATTGTTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACATAAGGCGGAGTGTGCACCGGTGGAGAGGTGGTTAGAGGAGGAGGAACATATTGCCGGGGAAGGTGACGGTGGCGTTAACGTTGATGAGGTGGTTGTGCTTGATAGTTGA 1146 0.4503 MRTRTGLCYPQTLQLSNMFSDTNNNKRHKRMPQNTSDFFELLPDDIVLSILGKLSSTATSPSDFISVLITCKRLNGLSLNSVVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMKSHAPSLYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDGLRELGHCLQDGYGVKQNVIEGRRFLVQANARELAAVLSNGNNNKQPLLTWSVNPGSSQPPQLRVLAGAGSVSGSGCPLLSDFGCNVPVQETHPANRFMTEWFDIRGGFPGPGMRLCSNSGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLEEEEHIAGEGDGGVNVDEVVVLDS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2799 381 Pfam MYND finger 310 350 IPR002893 -
Mtr3g2799 381 Gene3D - 301 354 - -
Mtr3g2799 381 SUPERFAMILY HIT/MYND zinc finger-like 306 355 - -
Mtr3g2799 381 SUPERFAMILY F-box domain 26 83 IPR036047 GO:0005515
Mtr3g2799 381 PANTHER MYND DOMAIN-CONTAINING 18 381 IPR044508 -
Mtr3g2799 381 SUPERFAMILY HCP-like 100 218 - -
Mtr3g2799 381 Gene3D Tetratricopeptide repeat domain 78 238 IPR011990 GO:0005515
Mtr3g2799 381 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 18 381 - -
Mtr3g2799 381 ProSiteProfiles Zinc finger MYND-type profile. 308 350 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2799 Mtr-Chr3 42015560 42017127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2799 - - gmx:100798136 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2799 3 42015560 42017127 Mtr3g2799 3 42015560 42017127 ECH
Mtr3g2799 3 42015560 42017127 Mtr8g2803 8 38723847 38725628 PCT