Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g2793 | ATGGATTGGGAAGGTCAAAAGCTAGCAGAGCAACTGATGCAGATACTGCTGCTAGCATTTGCTGTGATTGCGTTTGGAGCTGGATATATCACGGCTTCTTTCCAAACAATGATCCTCATATATGCTGGTGGTGTTATTCTCACCACATTAGTCACTATTCCCAATTGGCCCTTCTTCAACCATCATCCTCTTAAGTGGTTAGACCCGAGCGAAGCAGAAAAGCATCCAAAGCCAGAACCATCTTCGAATGTAGCTGCAAAGAAAAAATCCATTAAAAAGTAG | 282 | 0.4291 | MDWEGQKLAEQLMQILLLAFAVIAFGAGYITASFQTMILIYAGGVILTTLVTIPNWPFFNHHPLKWLDPSEAEKHPKPEPSSNVAAKKKSIKK* | 94 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g2793 | 93 | MobiDBLite | consensus disorder prediction | 69 | 93 | - | - | |
| Mtr8g2793 | 93 | Pfam | Microsomal signal peptidase 12 kDa subunit (SPC12) | 1 | 70 | IPR009542 | GO:0005787|GO:0006465|GO:0016021 | |
| Mtr8g2793 | 93 | PANTHER | SIGNAL PEPTIDASE COMPLEX SUBUNIT 1-RELATED | 1 | 93 | - | - | |
| Mtr8g2793 | 93 | PANTHER | MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT | 1 | 93 | IPR009542 | GO:0005787|GO:0006465|GO:0016021 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g2793 | Mtr-Chr8 | 38610633 | 38611951 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g2793 | K12946 | - | gmx:100801319 | 167.933 |
Event-related genes