Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2810 ATGGATTGGCAAGGGCAAAACCTAGCAGAGAAGCTAATGCAGATAATGTTGCTTGCATTTGCTGTGGTTGCATTTGGAACGGGATATCTTATGGCTTCTTTCAAGACGATGATGCTCATATATGCTGGTGGTGTTGTTCTCACCACACTGGTGACTGTCCCAAATTGGCCCTTTTTCAACCGCCATCCTCTCAAGTGGTTGGATCCAAGTGAGGTAGAAAAGCATCCGAAGCCACAGCTATCTCCTATTGTGAATTCAAAGAAGAAACCCATTAAGAAGTAG 282 0.4433 MDWQGQNLAEKLMQIMLLAFAVVAFGTGYLMASFKTMMLIYAGGVVLTTLVTVPNWPFFNRHPLKWLDPSEVEKHPKPQLSPIVNSKKKPIKK* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2810 93 MobiDBLite consensus disorder prediction 72 93 - -
Mtr3g2810 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 93 IPR009542 GO:0005787|GO:0006465|GO:0016021
Mtr3g2810 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016021
Mtr3g2810 93 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 1-RELATED 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2810 Mtr-Chr3 42083704 42085457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2810 K12946 - cit:102628157 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2810 3 42083704 42085457 Mtr3g2810 3 42083704 42085457 ECH
Mtr3g2810 3 42083704 42085457 Mtr8g2793 8 38610633 38611951 PCT