Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2767 ATGGAAATGATGCTTTCTCGTTTACCTTATCATGATTCCCTCAAACTACTTGAGGCTGATATTCACCATGCCAATGCTTTGGCTGCTGCAATTCCAAGAGGCAAGGGTGGAAGTGTTTTCCAAATGAAATTGGTTTACAGTCAATTGGCTCCTCTTTTTTTGTTGTTGTTACAATGGATGGATTGTTCTTGTTCATGTTTTCTACACAGATATCTCAACTTCTTCCATATTATTATATACAAGGTACATAATGATGGTAGACCAAGTATAACTTCTCATGGAAGGAAAGCAACCATCCAGGACTTTTATGCTGTTATATTACCGTCTCTCCAGCGGCTTCATGGTAGTTTGGAGAAGTTGGAGATTTGTATGAAAGGACACACTAGCTTGGACGGTCCAAGTTATGGCAAGAAGATGATTGAAGCAAATGGAAAACTAACCACCAATGTTGATTTGGAAAGAGAAGATGAATGTGGGATATGCTTAGAACCATGCACCAAAATGGTTTTGCCTAATTGCTGCCATGCTATGTGTATCAAATGCTACCGCAAGTGGAACACAAAGTCAGAGTCTTGTCCATTTTGCCGCGGGAGCATAAGAAGAGTTAATTCTGAGGATCTATGGGTACTCACTTGTGATGACGATGTAGTTGATGCCGAAACAGTTTCAAAAGAGGACTTGTTGCGATTCTACCTTTATATCAACAGCTTACCTAAAGATTACCCAGATGCACTTTTCTTAATGTATTATGAATATCTGATTTGA 765 0.3908 MEMMLSRLPYHDSLKLLEADIHHANALAAAIPRGKGGSVFQMKLVYSQLAPLFLLLLQWMDCSCSCFLHRYLNFFHIIIYKVHNDGRPSITSHGRKATIQDFYAVILPSLQRLHGSLEKLEICMKGHTSLDGPSYGKKMIEANGKLTTNVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNTKSESCPFCRGSIRRVNSEDLWVLTCDDDVVDAETVSKEDLLRFYLYINSLPKDYPDALFLMYYEYLI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2767 254 ProSitePatterns Zinc finger RING-type signature. 173 182 IPR017907 -
Mtr8g2767 254 PANTHER RING FINGER PROTEIN 41, 151 4 254 - -
Mtr8g2767 254 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 254 - -
Mtr8g2767 254 Pfam Ring finger domain 156 196 IPR001841 -
Mtr8g2767 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 207 IPR013083 -
Mtr8g2767 254 SUPERFAMILY RING/U-box 146 201 - -
Mtr8g2767 254 ProSiteProfiles Zinc finger RING-type profile. 158 196 IPR001841 -
Mtr8g2767 254 SMART ring_2 158 195 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2767 Mtr-Chr8 38338396 38340955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2767 - - gmx:100790422 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2845 3 42421940 42424156 Mtr8g2767 8 38338396 38340955 PCT