Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2540 ATGAGATTCACAATATTAATCTTATTATGTATCTTTCTTCTCTTTTCTACACAAACCTTATGCACCACCACCCTTGAACAAGACTTCAAAGAAGCACCAAAATACTACAACTCTCAAACCTGCAAAAATATTGAATCTTCCCACCATAGCAATCACACATGCTCAAATTCAGCCGTACACGTGGCAATGACACTCGACGTGTCCTACATCCGTGGCTCCATGGCAGCAATCCTCTCTATACTCCAACACACTTCGTGTCCGGAAAACATTGTTTTCCATTTCATTACATCTGCATCCGTATCCATTCTGAACCGAACTATAAACAACTCATTCCCCTATCTAAAATACCAAATTTACCCTTTCAACGACGGTCCAGTAGCCGGATTAATCTCCACCTCCATCCGCTCAGCTCTTGATACTCCGCTGAACTACGCCCGCACCTACTTAGCTGACCTTCTCCCTCTCTGCATCACCAAAATTGTTTACCTTGACTCCGACTTAATCCTCGTTGACGACATTGCAATACTCTTCGCTACACCTCTCCGATCAACCACCATCCTCGCCGCACCGGAGTATTGCAACGCAAATTTCAGTAACTATTTTACTCCTTCATTTTGGTCAAACCCTTCACTTTCACTCACATTTGCCAACCGTGAACGTAAGGCTTGTTACTTCAACACCGGAGTGATGGTTATTGATCTTCAACGGTGGCGTAAGGGTGAGTATACTACGATGATAAGGGAGTGGATGGAGTTGCAGAAGAGAATGAGAATCTATGAGCTTGGTTCGTTGCCGCCGTTTTTGTTGGTTTTTGCCGGGAGGATTACGCCGGTGGATCACCGGTGGAATCAGCATGGGCTCGGCGGTGATAATTTTCGTGGGCTTTGTCGGGATTTGCATCCAGGCCCGGTGAGTTTGTTGCATTGGAGTGGAAAAGGGAAGCCGTGGGCCAGGCTTGATGGGAATAGGGCTTGTCCTTTGGATGCTTTGTGGGCTCCATATGATTTGCTTAAAACTCGTTTTGCTCTTGAGGTGTAA 1038 0.4576 MRFTILILLCIFLLFSTQTLCTTTLEQDFKEAPKYYNSQTCKNIESSHHSNHTCSNSAVHVAMTLDVSYIRGSMAAILSILQHTSCPENIVFHFITSASVSILNRTINNSFPYLKYQIYPFNDGPVAGLISTSIRSALDTPLNYARTYLADLLPLCITKIVYLDSDLILVDDIAILFATPLRSTTILAAPEYCNANFSNYFTPSFWSNPSLSLTFANRERKACYFNTGVMVIDLQRWRKGEYTTMIREWMELQKRMRIYELGSLPPFLLVFAGRITPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDGNRACPLDALWAPYDLLKTRFALEV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2540 345 PANTHER HEXOSYLTRANSFERASE 2 345 - -
Mtr8g2540 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 59 325 IPR029044 -
Mtr8g2540 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 2 345 - -
Mtr8g2540 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 59 337 IPR029044 -
Mtr8g2540 345 Pfam Glycosyl transferase family 8 60 318 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2540 Mtr-Chr8 35817966 35819391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2540 27 343 Glycosyltransferase AT3G50760 70.126 2.17e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2540 K20893 - gmx:100805007 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2540 8 35817966 35819391 Mtr8g2540 8 35817966 35819391 ECH
Mtr5g0743 5 7278872 7280641 Mtr8g2540 8 35817966 35819391 ECH
Mtr5g0743 5 7278872 7280641 Mtr8g2540 8 35817966 35819391 PCT