Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0743 ATGGTAACATTAACATCCATGGTCTTCACCATTTCTCATTTCAATCTCCTAACTCTCTTATTTCTCTTCTCAACTTATCAACATGTCACCTGTACCACCACTCAACTCTTTAAACAAGCACCTAAATTCTACAACTCCCCTAACTGTCCCTCCATTCATACGTCAACATGGACAACTTCGTCCGAGCAAACTACACACACAAACACAGACGACTTTATTTGCTCAGACGAAGCAGTCCATGTTGCAATGACACTAGACATAAAATACCTCCGCGGCTCAATGGCGGCCATTCTCTCCGTCCTCCAACACTCCTCTTGTCCAGAAAACACCATCTTCCACTTCATCACCGCCGCATCGAAAACTACCTCCACCGTCACCCTTAACACCACCCTCTTAAACTCATTCCCATACTTAAAATTCCAAATCTACCCCTTCAACACTGAAACCATTTCAGGTCTAATCTCAACCTCAATACGCTCTGCACTCGATACACCTCTCAACTACGCGCGAAATTACCTCTCTAACCTTCTTCCAAACTGTGTTCACAAAATCGTTTACCTTGATTCTGATCTCATTCTTGTCGATGATATCGCAAAACTCGCTGCAACGAATCTCACAAACGAAGCCGTTTTAGCTGCACCTGAATACTGCAACGCGAATTTCAGTTACTATTTTACCCCTACGTTTTGGTCGAATCCTTCACTTTCGTTAACATTCGCGACTCGGAAAGCGTGTTACTTCAACACCGGAGTTATGGTGATTGATTTAGCGCGGTGGCGGATCGGAGATTATACGACGCAGATGACGGAATGGATGGAGCTTCAGAAGAGAATGAGGATCTATGAGCTTGGTTCATTGCCGCCGTTTCTGCTTGTTTTCGCAGGTAAAATAGTTCCGGTTGATCATCGGTGGAATCAACATGGGCTTGGCGGTGATAATTTCCATGGGCTTTGTCGGGATTTGCATCCGGGCCCGGTGAGTTTACTTCATTGGAGTGGGAAGGGTAAACCGTGGGCCAGGCTTGATGCTAATCGTCCTTGTCCGTTGGATGCTTTGTGGGCCCCATATGACCTTCTTGAAACTCCATTTGCTCTTGAGACCTAA 1104 0.4556 MVTLTSMVFTISHFNLLTLLFLFSTYQHVTCTTTQLFKQAPKFYNSPNCPSIHTSTWTTSSEQTTHTNTDDFICSDEAVHVAMTLDIKYLRGSMAAILSVLQHSSCPENTIFHFITAASKTTSTVTLNTTLLNSFPYLKFQIYPFNTETISGLISTSIRSALDTPLNYARNYLSNLLPNCVHKIVYLDSDLILVDDIAKLAATNLTNEAVLAAPEYCNANFSYYFTPTFWSNPSLSLTFATRKACYFNTGVMVIDLARWRIGDYTTQMTEWMELQKRMRIYELGSLPPFLLVFAGKIVPVDHRWNQHGLGGDNFHGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLETPFALET* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0743 367 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 346 IPR029044 -
Mtr5g0743 367 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 367 - -
Mtr5g0743 367 PANTHER HEXOSYLTRANSFERASE 7 367 - -
Mtr5g0743 367 Pfam Glycosyl transferase family 8 80 340 IPR002495 GO:0016757
Mtr5g0743 367 SUPERFAMILY Nucleotide-diphospho-sugar transferases 79 358 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0743 Mtr-Chr5 7278872 7280641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0743 17 365 Glycosyltransferase AT3G50760 66.761 7.14e-177 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0743 K20893 - gmx:100783054 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0743 5 7278872 7280641 Mtr5g0743 5 7278872 7280641 ECH
Mtr5g0743 5 7278872 7280641 Mtr8g2540 8 35817966 35819391 ECH
Mtr5g0743 5 7278872 7280641 Mtr8g2540 8 35817966 35819391 PCT