Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2529 ATGATAATAAATCAAGGTGACAAAGAAGATCAAACGAACACGTTCAACAAATATGCTTTTGCTTGTGCCATAGTTGCTTCAATGGTGTCCATCGTTTCTGGTTATGATACTGGTGTTATGAGTGGAGCAATGTTGTTCATAAAGGAAGACTTGGGAATCAGTGACACACAACAAGAGGTTCTAGCAGGAATCTTAAACCTATGCGCATTAGTAGGATCATTAACGGCTGGAAGAACCTCCGATTACATTGGACGTCGCTACACAATCTTCTTAGCTTCAATATTGTTCATCCTTGGTGCAGGTCTAATGGGGTATGGTCCAAACTACGCAATTTTAATGGTTGGAAGATGTGTTTGCGGTGTAGGTGTTGGTTTTGCTCTTATGATAGCACCAGTTTATTCAGCTGAAATTTCTTCTGCTTCATCAAGAGGATTCTTAACCTCTTTACCTGAACTTTGTATTGGTATTGGAATCTTGTTAGGTTATATATCAAACTATGTTTTGGGAAAATATTTGAGTTTGAAACTTGGTTGGAGATTAATGCTTGGTATTGCAGCTTTGCCTTCATTTGTAGTAGCTTTTTGTATTTTAACAATGCCTGAGTCACCAAGGTGGCTGGTTATGCAAGGTCAATTAGGAAAAGCGAAAAAAGTTCTAATGCAAGTTTCAAACACAACTCAAGAAGCAGAACTTCGTCTCAAGGATATAAAAATCGCTGCTGGTTTAGACGAAAATTGCAATGACGAAACTGTGAAGTTACCTCAAAAGTCTCATCAAGGTGAAGGGGTTTGGAAAGAGTTGATTTTAAGACCAACGCCTTCTGTACGTTGGATGTTAATTGCTGCAGTTGGGATTCATTTTTTCGAACATGCAACTGGTATTGAAGCTGTTATGTTATATAGTCCGAGAATTTTCAGAAAAGCTGGTATTACAAGTAAAGAAAAGCTTTTACTTGCAACTATTGGAGTAGGTTTAACAAAAATTGTTTTCCTTGTAATTGCTTTGTTTTTACTTGACAAACTTGGTAGAAGACGACTTTTGCAAATTAGCACCGGAGGAATGATTATTGGACTTACGCTATTGGGCCTTAGCTTGACCGTGGTGGATAAATCCAACGGAAACGTTTTATGGGCCTTGATCCTTAGCATCGTCGCAACTTATGCCTATGTTGCTTTCTTTAATATTGGGCTTGGGCCTATTACTTGGGTTTATAGTTCAGAGATATTTCCTTTGAAGTTGAGGGCACAAGGAGCAAGTATTGGAGTTGCTGTGAATAGAACCATGAATGCTGTTGTTTCTATGACTTTTATTTCAATCTATAAAGCTATCACAATAGGTGGAAGTTTTTTCATGTTTGCTGGTATATCTGTTTTAGCTTGGTTGTTTTTCTACTTTTTCCTTCCTGAAACTAAAGGAAAAGCTTTAGAGGAAATGGAGATGGTTTTTACCAAAAAATCAAGTGGTAAAAATGTGGCAATAGAAATGGATCCAATACAGAAGGTCTAG 1506 0.3752 MIINQGDKEDQTNTFNKYAFACAIVASMVSIVSGYDTGVMSGAMLFIKEDLGISDTQQEVLAGILNLCALVGSLTAGRTSDYIGRRYTIFLASILFILGAGLMGYGPNYAILMVGRCVCGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLGYISNYVLGKYLSLKLGWRLMLGIAALPSFVVAFCILTMPESPRWLVMQGQLGKAKKVLMQVSNTTQEAELRLKDIKIAAGLDENCNDETVKLPQKSHQGEGVWKELILRPTPSVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFRKAGITSKEKLLLATIGVGLTKIVFLVIALFLLDKLGRRRLLQISTGGMIIGLTLLGLSLTVVDKSNGNVLWALILSIVATYAYVAFFNIGLGPITWVYSSEIFPLKLRAQGASIGVAVNRTMNAVVSMTFISIYKAITIGGSFFMFAGISVLAWLFFYFFLPETKGKALEEMEMVFTKKSSGKNVAIEMDPIQKV* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2529 501 ProSitePatterns Sugar transport proteins signature 2. 118 143 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr8g2529 501 ProSitePatterns Sugar transport proteins signature 1. 76 93 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr8g2529 501 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 10 490 IPR045262 GO:0015144
Mtr8g2529 501 ProSitePatterns Sugar transport proteins signature 1. 334 351 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr8g2529 501 Gene3D MFS general substrate transporter like domains 11 486 IPR036259 -
Mtr8g2529 501 SUPERFAMILY MFS general substrate transporter 7 479 IPR036259 -
Mtr8g2529 501 PRINTS Sugar transporter signature 30 40 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2529 501 PRINTS Sugar transporter signature 113 132 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2529 501 PRINTS Sugar transporter signature 289 299 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2529 501 PRINTS Sugar transporter signature 383 404 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2529 501 PRINTS Sugar transporter signature 406 418 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2529 501 TIGRFAM SP: MFS transporter, sugar porter (SP) family 15 478 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2529 501 Pfam Sugar (and other) transporter 22 482 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr8g2529 501 PANTHER POLYOL TRANSPORTER 3-RELATED 10 490 - -
Mtr8g2529 501 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 471 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2529 Mtr-Chr8 35633271 35636450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2529 16 492 Organic Solute Cotransporters AT4G36670 67.292 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2529 - - var:108328789 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0768 5 7558496 7561164 Mtr8g2529 8 35633271 35636450 ECH
Mtr8g2529 8 35633271 35636450 Mtr8g2529 8 35633271 35636450 ECH