Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0768 ATGTTGTCTAGTGGAAAAGAAACAAATGGGCACAGCCAAGTATCATCCATGGAAAGCACGTGTGGGGATGTAAACCATCTCAACAAGCATGCTTGTGCTTGTGTGTTAGCTGCCACTATTATCTCTGCCATATTTGGTTATGTTACAACAGTGATGGCTGGAGCACTCTTATTCATAAAGGAAGAACTTGAAATCAGTGACATGCAAGTGCAGCTTCTAGCAGGAATCTTAAATGCATGTGCATTACCAGCATGCATGATTGCAGGAAGATTATCCGATTACATAGGTCGACGCTACACAATCATGCTATCGTCGATATTCTTCTTCTTAGGCTCAATTTTAATGGGGTATGGTTCATCTTTTCCAATCTTAATGATTGGAAGATGCATTGCAGGATTTGGTGTTGGTTTTGCACTTATCATAGTATCTGTTTACAGTGCAGAAATTTCATCTCCTTCTTATAGAGGTTTTCTAACTTCTCTACCAGATCTTTCCATTAACATAGGTTTCTTACTTGGTTATCTCTCAAATTATTTCCTTGGAAAATTATCTTTAAGACTTGGATGGAGAATAATGCTAGCTATTCCTTCAATACCTTCAATTGGTTTGGTAATATTAATGTTGCAATTGGTAGAGTCACCAAGATGGTTAGTAATGCAAGGAAGATTAGGTGATGCTAAGAAAGTTCTTTTATTAATCTCTAATTCAAAACAAGAAGCTGAACAAAGGATGAAGGAAATAAAAAATGCTGTTGGAATTGATGAAAATTGCACCCAAAACATTGTTCATGTTTCAAAGAAAACTCGTAGTGGTGGAGGAGCTTTAAAAGAAATGTTTTATAAACCTTCACCACATGTATATAGGATACTTATTGCAGCTATTGGTGTTCATATATTTCAAAATATTTGTGGAGTTGAGGGTATTTTTTTATATAGTCCAAGAATTTTTGGAAGAATGGGAATCACTGATAAGGGTACACTTCTTTTAGCTACAGTTGGTATTGGGATAAGCCAAACTTTATTCACATTACTATCATGTTTTTTGTTGGATAAAATTGGGAGAAGGATTCTATTATTGGTCAGTTCAGGAGGTGTGATTTTTTCTATGTTAGGGTTATGTGTTTGTTCAGCTATAGTGGAGAATTCTAAATTAGGAGAAGAACCATTATGGGCCATAATATTTACTATTATTGTTATATACATTATGGCAGGTTTTAATGCTATTGGAATTGGGGCTGTGACATGGGTTTATAGCACAGAGATATTTCCACTAAGGTTGAGAGCACAAGGACTTGGGGTTTGTGTGATTATGAATAGAATTACTAATGTGGCAGTGGTTACTAGTTTTATTTCAATTTATAAAACTATAACATTGGGTGGAACTTTCTTTTTGTTTGTTGGTACAAATGTTTTGGGTTGGTGGTTTTACTATTCTTTCTTGCCTGAAACTAAAGGAAGATCATTAGAAGATATGGAAACTATCTTTGGGAAAAATTCCAACTCTGAGGTACAAATGAAGTATGGAAGCAACAATGCATAG 1539 0.3509 MLSSGKETNGHSQVSSMESTCGDVNHLNKHACACVLAATIISAIFGYVTTVMAGALLFIKEELEISDMQVQLLAGILNACALPACMIAGRLSDYIGRRYTIMLSSIFFFLGSILMGYGSSFPILMIGRCIAGFGVGFALIIVSVYSAEISSPSYRGFLTSLPDLSINIGFLLGYLSNYFLGKLSLRLGWRIMLAIPSIPSIGLVILMLQLVESPRWLVMQGRLGDAKKVLLLISNSKQEAEQRMKEIKNAVGIDENCTQNIVHVSKKTRSGGGALKEMFYKPSPHVYRILIAAIGVHIFQNICGVEGIFLYSPRIFGRMGITDKGTLLLATVGIGISQTLFTLLSCFLLDKIGRRILLLVSSGGVIFSMLGLCVCSAIVENSKLGEEPLWAIIFTIIVIYIMAGFNAIGIGAVTWVYSTEIFPLRLRAQGLGVCVIMNRITNVAVVTSFISIYKTITLGGTFFLFVGTNVLGWWFYYSFLPETKGRSLEDMETIFGKNSNSEVQMKYGSNNA* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0768 512 PRINTS Sugar transporter signature 42 52 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0768 512 PRINTS Sugar transporter signature 125 144 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0768 512 PRINTS Sugar transporter signature 300 310 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0768 512 PRINTS Sugar transporter signature 396 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0768 512 PRINTS Sugar transporter signature 419 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0768 512 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 21 500 - -
Mtr5g0768 512 SUPERFAMILY MFS general substrate transporter 27 492 IPR036259 -
Mtr5g0768 512 Coils Coil 230 250 - -
Mtr5g0768 512 ProSitePatterns Sugar transport proteins signature 2. 130 155 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr5g0768 512 ProSitePatterns Sugar transport proteins signature 1. 88 105 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr5g0768 512 Gene3D MFS general substrate transporter like domains 24 499 IPR036259 -
Mtr5g0768 512 TIGRFAM SP: MFS transporter, sugar porter (SP) family 31 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0768 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 484 IPR020846 GO:0022857
Mtr5g0768 512 Pfam Sugar (and other) transporter 35 495 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr5g0768 512 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 21 500 IPR045262 GO:0015144
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0768 Mtr-Chr5 7558496 7561164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0768 23 495 Organic Solute Cotransporters AT2G18480 52.743 1.44e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0768 - - gmx:100786322 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0768 5 7558496 7561164 Mtr8g2529 8 35633271 35636450 ECH
Mtr5g0768 5 7558496 7561164 Mtr5g0768 5 7558496 7561164 ECH