Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2505 ATGGGGAAAGACTATGATGATGTTAGGAAGCCATTTGTCAATAACAACAACTTTTTTTTGAAAGATATCAATAACAACAATAATAATGCTGGATCTGGTTCTTTTTATATTGTGCTATGTGTTCTCATTGTAGCTTTGGGTCCTATCCAATTTGGTTTCACGTGTGGCTATTCTTCACCAACTGAAGCAGATATGATTCAAGATCTTAATCTCACAATTTCACAGTTTTCATTGTTTGGTTCATTAGCCAACATTGGTGCAATGGTGGGAGCAACAGTCAGTGGTCAAATAGCAGGATACTTTGGGCGTAAGGGGTCACTAATAGTCGCAGCAGTCCCAAATATATTTGGATGGCTAGCCATTTCCATAGCCAAAGACTCGTCGCTTCTATATATGGGAAGGTTGTTGGAAGGTTTTGGAGTGGGGATAATATCTTATGTGGTACCTGTCTATATAGCAGAAATATCACCGCGAACCATGAGGGGTAGCCTAGGATCTGTGAACCAGCTATCAGTTACAATTGGGATCATGCTGGCTTATTTGTTAGGCATGTTTTTCAAATGGAGAACGCTATCAATATTAGGAATTTTACCATGTGCAATATTAATACCCGGGTTGTACTTCATTCCAGAATCACCTAGATGGTTGGCCGAAATGGGAATGATGGATAAATTTGAATCTTCACTACAATCTTTACGAGGACCCAAGGTTGATATTAATATTGAAGCACAAGAAATACAGGGGTCATTGGCATCGAATAACACAACAGATACTGTACGCATAGCTGATCTTAAGAAGAGAAGATATTGGTTTCCTTTGATGGTAGGTGTAGGATTGCTTGTGCTGCAACAACTTTCTGGTATCAACGGTGTATTTTTCTATGCAAGTAAAATCTTTTCAAGCGCAGGAATTTCATCCAGCAATGCTGCTACATTTGGGCTAGGAGCTATTCAGGTTGTAATGACTGGGGTTGCTACTTGGTTAGTAGACAGAAGTGGTAGAAGAGTGCTTCTTATAGTATCTTCCTCTGTGATGACTGTTAGCCTACTGCTTGTTGCTACAGCATTTTATCTACAGGGAGTTGTAACAAGTGGCTCTGACCTTTATAGAATGATGGGGATGCTCTCTGTTGTGGGACTTGTGGCTTTGGTAATTGGTTTTGCTCTTGGCATTGGACCAATCCCTTGGCTTATAATGTCTGAGATACTTCCACCAAATATTAAGGGGCTTGCTGGAAGTGCTGCAACATTTTTGAATTGGTTCACTGCCTCTCTGATCACCATGACTGCACACTTTCTTCTAGATTGGAGCAATGCAGGAACATTTACAATTTATGCAATTTTTTCTGCCATCAACGTTGCTTTTGCTCTACTTTGGGTTCCTGAGACCAAGGACAGAACATTGGAAGAAATTCAGGCATCGTTTATTAGATAA 1434 0.401 MGKDYDDVRKPFVNNNNFFLKDINNNNNNAGSGSFYIVLCVLIVALGPIQFGFTCGYSSPTEADMIQDLNLTISQFSLFGSLANIGAMVGATVSGQIAGYFGRKGSLIVAAVPNIFGWLAISIAKDSSLLYMGRLLEGFGVGIISYVVPVYIAEISPRTMRGSLGSVNQLSVTIGIMLAYLLGMFFKWRTLSILGILPCAILIPGLYFIPESPRWLAEMGMMDKFESSLQSLRGPKVDINIEAQEIQGSLASNNTTDTVRIADLKKRRYWFPLMVGVGLLVLQQLSGINGVFFYASKIFSSAGISSSNAATFGLGAIQVVMTGVATWLVDRSGRRVLLIVSSSVMTVSLLLVATAFYLQGVVTSGSDLYRMMGMLSVVGLVALVIGFALGIGPIPWLIMSEILPPNIKGLAGSAATFLNWFTASLITMTAHFLLDWSNAGTFTIYAIFSAINVAFALLWVPETKDRTLEEIQASFIR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2505 477 PANTHER - 18 475 - -
Mtr8g2505 477 ProSitePatterns Sugar transport proteins signature 2. 136 161 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr8g2505 477 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 464 IPR020846 GO:0022857
Mtr8g2505 477 CDD MFS_GLUT6_8_Class3_like 38 470 IPR044775 GO:0008643|GO:0051119
Mtr8g2505 477 SUPERFAMILY MFS general substrate transporter 41 472 IPR036259 -
Mtr8g2505 477 Gene3D MFS general substrate transporter like domains 32 477 IPR036259 -
Mtr8g2505 477 PANTHER SUGAR PORTER (SP) FAMILY MFS TRANSPORTER 18 475 - -
Mtr8g2505 477 Pfam Sugar (and other) transporter 41 475 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr8g2505 477 PRINTS Sugar transporter signature 48 58 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2505 477 PRINTS Sugar transporter signature 131 150 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2505 477 PRINTS Sugar transporter signature 283 293 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2505 477 PRINTS Sugar transporter signature 377 398 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2505 477 PRINTS Sugar transporter signature 400 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr8g2505 477 TIGRFAM SP: MFS transporter, sugar porter (SP) family 29 471 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2505 Mtr-Chr8 35404455 35409398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2505 6 475 Organic Solute Cotransporters AT1G75220 65.474 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2505 K03444 - gmx:100798102 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2505 8 35404455 35409398 Mtr8g2505 8 35404455 35409398 ECH
Mtr5g0788 5 7771645 7775798 Mtr8g2505 8 35404455 35409398 ECH