Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0788 ATGAGCTTGATCAGAGAAGATTATGAAGATGGAAACAACCTTAAGAAACCATTTCTTAACACTGGTAGCTGGTACAGAATGGGATCAAAACAAACTAATATCTTAAATTCTTCAACTCAATATGTCATGCGAGATTCTTCTGTTTCTGTCCTCCTTTGTGTCCTCATTGTTGCATTGGGTCCTCTTCAATTCGGCTTCACGTGTGGCTATACTTCTCCAACGCAAGAGAGTATAATCAGTGATCTAAACCTCTCACTTTCAGAGTTTTCTCTATTTGGATCTTTATCCAATGTTGGAGCCATGGTGGGAGCCATTGCTAGTGGTCAAATGGCAGAATACATCGGACGCAAAGGGTCATTGATTATTGCTGCGATCCCCAATATAATAGGATGGTTGGCCATCTCTTTTGCCCAAGACTCGTCGTTTTTGTTTATGGGGAGGTTTTTAGAAGGTTTTGGCGTCGGGATAATCTCTTATGTGGTGCCTGTTTATATAGCTGAAGTTTCACCTCAAAACATGAGAGGTACCCTTGGATCAGTGAACCAGCTATCTGTCACAATTGGAATATTGCTAGCTTATTTGTTGGGCCTTTTTGTCAATTGGAGAATACTAGCAGTTCTAGGAATTTTACCATGTACAATATTAATACCTGGATTATTTTTCATACCAGAATCACCAAGATGGTTGGCCAAGATGAGAATGACAGAAGAGTTTGAGACTTCTTTGCAAGTGCTACGAGGATTTGATACTGATATATCTCTTGAAGTACATGAAATTAAGAAATCTGTGGAATCAATGGGAAAAGGTGTTACAATCCAGTTTGCAGATCTTAAGATGAAAAAATATTGGTTTCCTTTAATGGTAGGGATTGGATTACTTGTACTTCAGCAATTGAGTGGAACCAATGGAGTTTTGTTTTATTCAAGTACAATCTTTCTAAATGCAGGAGTGTCATCAAGTAATGCTGCTACAGTTGGACTTGGGATTATTCAGATATCCTCATCAATAATGACAGGAAGCCTTTTTCTTGTCTCAATAGCATTCTATTTTGAGGGAGTTACAGAGAAGGATTCTCCTCTATACAGCTTTTTGGGAATACTTTCTGTTGTTGGGCTTGTGGCTATGGTGATTGGCTACTCTCTTGGACTTGGACCAATCCCTTGGCTTATAATGTCTGAGATACTTCCTGTGAATATAAAGGGACTTGCTGGCAGCATAGCTACCTTGACAAATTGGCTAACTTCATGGATAATCACAATGACTGCAAACTTGCTTTTGACTTGGAGTAGTGGAGGAACATTCTTAATCTACACTGTGATGGCTGCGTTTACCGTTGTTTTCGCGGCAATTTGGGTCCCCGAGACAAAAGGAAGAACATTGGAAGAAATTCAATTCTCCTTTAGATAG 1407 0.3937 MSLIREDYEDGNNLKKPFLNTGSWYRMGSKQTNILNSSTQYVMRDSSVSVLLCVLIVALGPLQFGFTCGYTSPTQESIISDLNLSLSEFSLFGSLSNVGAMVGAIASGQMAEYIGRKGSLIIAAIPNIIGWLAISFAQDSSFLFMGRFLEGFGVGIISYVVPVYIAEVSPQNMRGTLGSVNQLSVTIGILLAYLLGLFVNWRILAVLGILPCTILIPGLFFIPESPRWLAKMRMTEEFETSLQVLRGFDTDISLEVHEIKKSVESMGKGVTIQFADLKMKKYWFPLMVGIGLLVLQQLSGTNGVLFYSSTIFLNAGVSSSNAATVGLGIIQISSSIMTGSLFLVSIAFYFEGVTEKDSPLYSFLGILSVVGLVAMVIGYSLGLGPIPWLIMSEILPVNIKGLAGSIATLTNWLTSWIITMTANLLLTWSSGGTFLIYTVMAAFTVVFAAIWVPETKGRTLEEIQFSFR* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0788 468 SUPERFAMILY MFS general substrate transporter 50 464 IPR036259 -
Mtr5g0788 468 PANTHER - 15 466 - -
Mtr5g0788 468 ProSitePatterns Sugar transport proteins signature 1. 107 124 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr5g0788 468 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 15 466 - -
Mtr5g0788 468 ProSitePatterns Sugar transport proteins signature 2. 149 174 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr5g0788 468 CDD MFS_GLUT6_8_Class3_like 51 462 IPR044775 GO:0008643|GO:0051119
Mtr5g0788 468 Gene3D MFS general substrate transporter like domains 43 468 IPR036259 -
Mtr5g0788 468 PRINTS Sugar transporter signature 61 71 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0788 468 PRINTS Sugar transporter signature 144 163 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0788 468 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0788 468 PRINTS Sugar transporter signature 369 390 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0788 468 PRINTS Sugar transporter signature 392 404 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr5g0788 468 ProSiteProfiles Major facilitator superfamily (MFS) profile. 53 456 IPR020846 GO:0022857
Mtr5g0788 468 Pfam Sugar (and other) transporter 54 464 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0788 Mtr-Chr5 7771645 7775798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0788 5 468 Organic Solute Cotransporters AT1G75220 72.016 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0788 K03444 - gmx:100813399 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0788 5 7771645 7775798 Mtr5g0788 5 7771645 7775798 ECH
Mtr5g0788 5 7771645 7775798 Mtr8g2505 8 35404455 35409398 ECH