Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2330 ATGAACAACATCTTCAAGATCATGCTTTGGACTCGTTCTCTAACCCACTTCAGATCAACTCACCACACCTTCTCACGTAAATTCTCAAACTTTTCTAAGGACCCTGATCGAGGATCATGGGAATCAATGCAAGGGCTAGTTCATTGCCATGCAAATTCTGTTCCTTTGTCACCTATCAACTTCTTGGAGAGAGCAGCAAAGGTTTGTAGAGACAGAACATCACTTGTTTATGGTTCTTTGAAGTATAATTGGGGTCAAACTCATCAACGTTGTCTCAAACTTGCTTCTTCTCTTACCCAGTTAGGGATTTCCCGTGGAGATGTGGTTGCCACACTAGCACCAAATGTCCCTGCAATGTATGAGCTGCATTTTGCTGTACCAATGGCTGGAGCCATTCTTTGTACCCTTAATTCGCGTTTAGACGCAGCTATGGTTTCAGTCCTGCTCGAGCATTCACAAGCGAAGATCCTTTTTGCAGACCACCAACTACTTGAGATTGCTCAAGGAGCATTGGACTTGCTTCGCGAAAGAGGAACAAAATTGCCAATTATAGTCTTAGTAAATGATTCCGATTTCTCATCTCCGATCCGCATTACGTCAACGACCTACGAGTATGAGAAGCTAATGGAAGTTGGTGATAATGGTTTCAATATTGTAAAACCGCAAAGTGAATGGGATCCTATAAGTATAAATTACACCTCAGGAACCACATCTAGACCTAAAGGAGTTGTCTACAGCCATAGAGGTGCTTATCTAAATTCTTTAGCAACAGTTTTACTCTTTCAAATGGACATCTTTCCTGTTTATCTTTGGAATGTTCCGTTGTTCCATTGCAACGGTTGGTGTCTCCCTTGGGGAGTGGCAGCACAATTTGGAACAAATATTTGTCTAAGGAAAGTCTCTCCACGGAACATATTTGACAACATAATTCAGCATAAGGTGACACACATGGGAGGAGCTCCTACAGTGCTTAACATGATTTTGAATTCTGCGTCGACTCATAGAAAACCACTCAATCACAAGGTTTTAGTGATGACAGGTGGTTCACCTCCACCGCCGCAGATTCTTTCCAAGATTGAAGAAATCGGTTTTAGCATTTCTCACCTCTATGGCTTGACAGAAACGTACGGTCCGGGGAGTTTTTGTGCGTGGAGACCTGAGTGGGACACATTGCCTCCTGAAGAAAGATCAAAGATGAAAGCTAGGCAAGGTGTGCCGCATGTGGCACTGGAGGAAATTGATGTTAAAGATTCTGCAACTATGGAAAGTGTTCTAGCTGACGGAAAAACGGTTGGCGAGATAATGTTTAGAGGGAATACAGTGATGAGTGGATATTTTAGAGATTTGAAAGCAACAGAAGAAGCTTTCAAAGACGGTTGGTTTCATAGCGGGGATCTAGCTGTGAAACACTCTGATGGTTACATAGAAGTTAAGGATAGATTGAAGGATATAATAGTATCTGGGGGAGAAAACATTAGCTCGGTCGAGGTAGAAACTGTTTTGTATAGTCATCCGGCAGTTCTTGAGGCCGCAGTAGTTGCCCGGCCAGATGATCATTGGGGTCAAACTCCTTGTGCTTTTTTGAAGCTGAAAGAGGGGTTTGATCAAAATGCTCAAGAAATAATCGCCTTTTGTAGGGAACGTTTGCCTCACTACATGGCTCCTAAAACAGTCATTTTTCTAGATATGCCAAAGACTTCAACAGGTAAGATACAAAAGTATATTTTAAGGGAGAAAGCCAAGGCTTTGGGAAGTATATGTATATCCAGCCCCTTGAATTGTGAAAAAGCTGTTGTTGATTGCTCAAGTAAGTTTAGGGAATAG 1824 0.4221 MNNIFKIMLWTRSLTHFRSTHHTFSRKFSNFSKDPDRGSWESMQGLVHCHANSVPLSPINFLERAAKVCRDRTSLVYGSLKYNWGQTHQRCLKLASSLTQLGISRGDVVATLAPNVPAMYELHFAVPMAGAILCTLNSRLDAAMVSVLLEHSQAKILFADHQLLEIAQGALDLLRERGTKLPIIVLVNDSDFSSPIRITSTTYEYEKLMEVGDNGFNIVKPQSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFQMDIFPVYLWNVPLFHCNGWCLPWGVAAQFGTNICLRKVSPRNIFDNIIQHKVTHMGGAPTVLNMILNSASTHRKPLNHKVLVMTGGSPPPPQILSKIEEIGFSISHLYGLTETYGPGSFCAWRPEWDTLPPEERSKMKARQGVPHVALEEIDVKDSATMESVLADGKTVGEIMFRGNTVMSGYFRDLKATEEAFKDGWFHSGDLAVKHSDGYIEVKDRLKDIIVSGGENISSVEVETVLYSHPAVLEAAVVARPDDHWGQTPCAFLKLKEGFDQNAQEIIAFCRERLPHYMAPKTVIFLDMPKTSTGKIQKYILREKAKALGSICISSPLNCEKAVVDCSSKFRE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2330 607 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
Mtr8g2330 607 CDD ttLC_FACS_AEE21_like 54 578 - -
Mtr8g2330 607 Pfam AMP-binding enzyme 63 487 IPR000873 -
Mtr8g2330 607 SUPERFAMILY Acetyl-CoA synthetase-like 40 581 - -
Mtr8g2330 607 Gene3D - 482 584 IPR045851 -
Mtr8g2330 607 PANTHER ACYL-ACTIVATING ENZYME 21 586 - -
Mtr8g2330 607 Gene3D - 44 481 IPR042099 -
Mtr8g2330 607 Pfam AMP-binding enzyme C-terminal domain 496 570 IPR025110 -
Mtr8g2330 607 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 21 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2330 Mtr-Chr8 33781840 33785102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2330 119 586 Miscellaneous Gene Families AT1G20560 62.553 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2330 - - gmx:100500429 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2330 8 33781840 33785102 Mtr8g2330 8 33781840 33785102 ECH
Mtr5g0957 5 9444148 9449893 Mtr8g2330 8 33781840 33785102 PCT