Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0957 ATGACGCAAGACCTGGTTGAGTGCTCTAAAGGTTCACACATACCTTTGACACCGATCTGTTTCCTTGAACGAGCAGCCACTGTGTATGGTGACAAAGTTTCCATCATCTACAATGATCATGTTAGATTTTCTTGGAGAGAAACCTATGAAAGATGTCTCAAGCTTGCTTCTGCTTTGGTCAACTTAGGAATTTCTAATGGTGATATTGTTGCAACTTTGGCACCAAATACTCCAGCACACTATGAGCTTCATTTTGGTGTACCAATGGCAGGTGCTATTATTTCTTCACTTAACCTCAAACTAGATGCAACAACATTAGCATTAATATTGGAACAATTAGAGTCTTGCAAAATCATATTTGTAGACTATGAGTTTATTGATTCTGTACTCAAAGCATCAAAAATAATTTCCCAAAGAAATTTCAAGCCACCCCTTATTGTCCTAATACAAGATCATGGCCAACTAGTGAAAGATATACCTCAAGATACCTTAATATACCATGAACTTCTTGAAAAGGGGCAAAAAGATTTTAAGATTTCAATGCCTATAAATGAATGTGATCCTATATCAGTGAATTACACATCAGGCTCAACTGGAATTCCAAAAGGAGCAGTTTATAGTCATAGAAGTGTCTACCTTAATTCACTCGCAACTATTACTCGTTTCGACGTGAATCCTATGCCGGTGTTTTTATGGACAGTTGACATGTTTAGATGCAATGGATGGTGTTTCATTTGGTTAATGCCTGCTCTTGGTGGTACAAACATTTGTCTTAGAAATAATTTTTCAGCAAAAGATATTATTGATGCAATTCATGTTCATAAGGTAACCCATTTGTGTGGTGCACCTACCCTTCTGGAAATTATTGCAAATTGTGAAATTATTAGGCCTTTTTCTCATAAGGTGAGTGTCACAGTTGCTGGTATATTACCATCATTCAAAATTCTTAACAAAGTGGCAGAGCTAGGATTTGATGTTAATATTGGTTATGGTATGACTGAAACATTAGGTCCAGTTATTGTAAGAAAGTGGAAACAAAATTTTGATGATGATATTACAAAGCTGAATTATGTTGATAAAAAAGGGGTTATAGACTTTATGATGGTTGAAGTTGATGTGAAAGATCCAAATACAATGAAGAGTGTTCCATATGATGGAAAAACCATAGGTGAAATTATGTTTAAAGGGAATACTTCAATGTCAGGGTATCTTAAGAGTTCACAAGTGAGTCATGAAGCTTTTAGGGATGGCTGGTATAGGACTAGGGACCTAGGTGTTAGGTTACCTAATGGTTCTTTTAATTTGAAAGATAGAGCAAAAGATATTATTTATTCTAAGGGTGAGTTTGTGAGTTCATTAGAGGTGGAAGCTGTTTTGTTGAATCATCCAATGGTTTTGAAAGTAGCTGTTGTGGGGAGATATGATGATGATGAGTGTTTGGTTGAGTCACCTTGTGCAATTGTGAAATTGAAAGATGGATGTAATGCTAATATTGAAGATATTATCAAGTTTTGTGAAGATCAATTGGATGCTCATATGGTTCCTAAGAGTGTGGTGTTTGTTGATTTGCCTCTTAATTCAACTGGTAAGGTACAAAAGTTTGTTATTAGAGAAAATATTAAAAGTATTGGGTGGTGTGACTCAATTAATTAA 1653 0.3527 MTQDLVECSKGSHIPLTPICFLERAATVYGDKVSIIYNDHVRFSWRETYERCLKLASALVNLGISNGDIVATLAPNTPAHYELHFGVPMAGAIISSLNLKLDATTLALILEQLESCKIIFVDYEFIDSVLKASKIISQRNFKPPLIVLIQDHGQLVKDIPQDTLIYHELLEKGQKDFKISMPINECDPISVNYTSGSTGIPKGAVYSHRSVYLNSLATITRFDVNPMPVFLWTVDMFRCNGWCFIWLMPALGGTNICLRNNFSAKDIIDAIHVHKVTHLCGAPTLLEIIANCEIIRPFSHKVSVTVAGILPSFKILNKVAELGFDVNIGYGMTETLGPVIVRKWKQNFDDDITKLNYVDKKGVIDFMMVEVDVKDPNTMKSVPYDGKTIGEIMFKGNTSMSGYLKSSQVSHEAFRDGWYRTRDLGVRLPNGSFNLKDRAKDIIYSKGEFVSSLEVEAVLLNHPMVLKVAVVGRYDDDECLVESPCAIVKLKDGCNANIEDIIKFCEDQLDAHMVPKSVVFVDLPLNSTGKVQKFVIRENIKSIGWCDSIN* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0957 550 Gene3D - 7 439 IPR042099 -
Mtr5g0957 550 Gene3D - 440 543 IPR045851 -
Mtr5g0957 550 SUPERFAMILY Acetyl-CoA synthetase-like 15 540 - -
Mtr5g0957 550 Pfam AMP-binding enzyme C-terminal domain 454 530 IPR025110 -
Mtr5g0957 550 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Mtr5g0957 550 Pfam AMP-binding enzyme 22 444 IPR000873 -
Mtr5g0957 550 PANTHER ACYL-ACTIVATING ENZYME 24 542 - -
Mtr5g0957 550 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 24 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0957 Mtr-Chr5 9444148 9449893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0957 82 543 Miscellaneous Gene Families AT1G20560 46.072 3.02e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0957 - - lang:109330780 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0957 5 9444148 9449893 Mtr8g2330 8 33781840 33785102 PCT