Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2310 ATGTTTGTCAAGAAACTCGTTGAGAAAGCTTCCATTAAGAAGCCTGGTGGAAATTCAATAGAAGGATTAAAGGCCAGTGATGTAGATCCACGAGTTGTATTTCATCAAGGGATACCATCAGGTGGTGCCAAGTTTGCCTATGACTCCATTCAGAAGATACTTGCTCTTTCTACAAAGGATGGCCGGATTAAACTATATGGAAAAGATAATGCACAAGCTCTGCTTGATTCTAGTGAGCCTCTACCTAGCAAGTTTTTACAGTTCATCCAGAACCAAGGCATCCTTTTAAATGTCACTTCCAATAATCATATTGAGGTTTGGGACATAGAGAAGAAAATATTGTCTGATGTATATGTTGCTAAAGAAGAAATCACTTGTTTTGCAGTCATTCAACATAGCCTGTATATGTATATTGGACATTCTAATGGTAATATATCAGTTTTGAAGCTTGAGCAAGATCCATGGCATATAGTTCGGATGAAATACACCATACCCTTTTCTGCTTCCTATGGGAATTCTGAAGTGTCTGATGACACTACTGTCATGCATATACTCCCTCAACCAGCAGCTGAAAGTAAGAGGGTTCTCGTAATCTTTCGAAACGGCCAAATAATATTATGGGATATTCAGGAAAGCAGGACTGTTTTCAGAACTGGTGGAAATATGTCGCAGTCACTGCATAATGAAACAAAGAAAGTGACTTCTGCATGTTGGGCATGTCCTTTTGGAAGTAAAGTAGTTGTTGGATACAGCAACGGAGAGATCTTCATTTGGAGTGTCCCTTCTCTAAATATAGGAAATGGTTCTTCTGCATCTGATTATTATAGTAGTCAAAGCACTCCTTTGCTCAAACTTAACTTGGGATACAAGTCGGAGAAAATTCCCATAGGATCAATAAAATGGCTTTATGCTGGAGGAAAGGCTAGTCGATTATATGTCATGGGAACTTCTGATTATGCAAGTTCAAACTTGTTACAGGTAGTGTTGTTGAATGAGCAAACGGAATCTCGCACGATTAAGTTGGGACTTCTTTTGTCTGAAAGCTGTGTTGACATGGAGATCGTATCAACTTCATCTGAGCAAGGCAAGCAAAAACAAGATTCTTTCCTTTTGCTTGGGAAGTCAGGTCATGTACATCTATATGACGATACTTTTATTGAAAGGTATCTCCTACAATGCCAATCTAAGTCAACACCTTCACTTCCAAAGGACGTAACTGCGAAGTTACCACTGGCAGATTCAAGCATCACAACTGCCAAATTCATCACCAACAATACCAATATGTTTTATTCTGATGATGAGTACTACAAGCAGCTGGTGAAAAATCATCCACTTTTTGTTCCTGTTGAAACAAATCAAAAAGATGGGATTAGCCCAAGTTCTGCTAAATTTTCTGGATTTTCAAAAGTTCAAAACTTGTATATAACTGGACATAGCAATGGAGCTGTAAACTTCTGGGATGCTTCATGCCCACTTTTCACCCCAATTTTGCAATTAAAACAACAGAGTGAAAATGACTTTTCATTAAGTGGTATACCCTTGACAACACTGTACTTTGACATCAACTCTCCTCTTCTTGTTTCCGGTGACCAGAGTGGAACGGTTCGCATCTTTAGATTCAAACCTGAACCATATGCCACCAACATCTTTAGTGGTTCAAAGAAAGGAACTGATCATATTATCCAAAGTATGAAAATCGTAAAGATTAATGGTGCCATAATTTCTGTGAACATAGATCATAGCTCAAAGCATCTTGCTGTTGGTTCCGATCAAGGGCATGTTTCAGTTTATAACATGGATGACCTAACTTTGTTATATCAGAAACACATTTCAAGTGAAATTTCTGCTGGTATCATCTCGCTGCAGTTCCTAACATGCAGTTTGAATGGTTTCGATAAAAACATTTTAGTGGTTGGAACAAAAGATTCTTCTGTTCTGGCACTTGATGATGAAACTGGTAACATGATGGGCACAGGAACTGTTCATCCTAAGAAGCCCTCTAAAGCTCTACTTATGCAGGTGTTTGATGGACAAAGTGGACAATTAATTGGATCAATTACAAAAGATGGACTAGACTTGAGTGCCGCGAATCATATTGAGAATGCAACAACAAAGCAATTGCACATTCTGCTTTGTTCAGAGAAAGCTTTATATGTCTATTCATTAGTGCATGCTGTTCAGGGAGTTAAAAAGGTACTTCAAAAGAAGAAGTTTCACTCCTCTTCCTGTTGTTGGGCATCAACATTTTACGGTCCCTCCGGTGTCGGCCTTGTACTCCTTTTCACTGACGGAAGAGTAGAACTAAGGTCTTTGCCAGAGTTATCCTTGATTGTGGAGGCTTCAATTAGAGGTTTCAACTATTCACCTCCAAAATCAAAGTCAATTTCTGATTGGCAAATATGTTGTTCGTCCAAAGGAGATCTTGTTTTGGTGAATGGAGACCAAGAAATTTTGGCTGTGTCATTGTTGGTCCAAAGGAGTATTTTCAGGATTTTGGATTCTGTTAGCTGCATCTACAGAAAAGAAATGATGCTGTCACAAGAAGAACTTGTCACTGTCCCAGTCATTCATAAGGAAAAGAAAAAGGGTCTATTCAGCTCTTTCTCTGGCAGTAAAGAAAAACATGCCCCCCTCATAGAAACAGAAGATTCTAGAGAAAGTATCCAGAAACTCTCGGTGATCTTTTCAGAAGAAAATTTTCCATCTGAGGCTGATAATAATGATAACCTGACTGCTGATGAAGACGAGGTCGAGTTAAACATAGATGACATTGACCTAGATGATCATGTAGAAAAGCGCAAAGATCACGGGATATTGGGAATTGGAGCTCTTAATAAGAAGAAATTGACTGGAAAATTTCAGGCTCTAAAAGGAAGATTGAAAGAGATGAAGGGCAACATCCAGAAAACATCAGCTAAAGAAGAGCAACAACAAGAAGAGCAACCTGCTACTGTCGACCAAATCAAGAAGAGATACGGATTTTCTTCTTCCTCTAATGAAACAAGCGCTGCTAAAATGGCAGAAAGCAAGCTACAAGAGAACTTGAAAAAATTGCAGGGTATCAACTTAAGAACTACAGAAATGCAAGATACAGCAAAATCATTTTCATCAATGGCAAACCAAGTACTGCGAACTGCTGAACAGCAACAAGACAAAAGAAGTTGA 3165 0.3874 MFVKKLVEKASIKKPGGNSIEGLKASDVDPRVVFHQGIPSGGAKFAYDSIQKILALSTKDGRIKLYGKDNAQALLDSSEPLPSKFLQFIQNQGILLNVTSNNHIEVWDIEKKILSDVYVAKEEITCFAVIQHSLYMYIGHSNGNISVLKLEQDPWHIVRMKYTIPFSASYGNSEVSDDTTVMHILPQPAAESKRVLVIFRNGQIILWDIQESRTVFRTGGNMSQSLHNETKKVTSACWACPFGSKVVVGYSNGEIFIWSVPSLNIGNGSSASDYYSSQSTPLLKLNLGYKSEKIPIGSIKWLYAGGKASRLYVMGTSDYASSNLLQVVLLNEQTESRTIKLGLLLSESCVDMEIVSTSSEQGKQKQDSFLLLGKSGHVHLYDDTFIERYLLQCQSKSTPSLPKDVTAKLPLADSSITTAKFITNNTNMFYSDDEYYKQLVKNHPLFVPVETNQKDGISPSSAKFSGFSKVQNLYITGHSNGAVNFWDASCPLFTPILQLKQQSENDFSLSGIPLTTLYFDINSPLLVSGDQSGTVRIFRFKPEPYATNIFSGSKKGTDHIIQSMKIVKINGAIISVNIDHSSKHLAVGSDQGHVSVYNMDDLTLLYQKHISSEISAGIISLQFLTCSLNGFDKNILVVGTKDSSVLALDDETGNMMGTGTVHPKKPSKALLMQVFDGQSGQLIGSITKDGLDLSAANHIENATTKQLHILLCSEKALYVYSLVHAVQGVKKVLQKKKFHSSSCCWASTFYGPSGVGLVLLFTDGRVELRSLPELSLIVEASIRGFNYSPPKSKSISDWQICCSSKGDLVLVNGDQEILAVSLLVQRSIFRILDSVSCIYRKEMMLSQEELVTVPVIHKEKKKGLFSSFSGSKEKHAPLIETEDSRESIQKLSVIFSEENFPSEADNNDNLTADEDEVELNIDDIDLDDHVEKRKDHGILGIGALNKKKLTGKFQALKGRLKEMKGNIQKTSAKEEQQQEEQPATVDQIKKRYGFSSSSNETSAAKMAESKLQENLKKLQGINLRTTEMQDTAKSFSSMANQVLRTAEQQQDKRS* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2310 1054 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1050 - -
Mtr8g2310 1054 Pfam Lethal giant larvae(Lgl) like, C-terminal 721 828 IPR013905 -
Mtr8g2310 1054 Coils Coil 946 980 - -
Mtr8g2310 1054 Gene3D - 41 163 IPR015943 GO:0005515
Mtr8g2310 1054 Gene3D - 173 507 IPR015943 GO:0005515
Mtr8g2310 1054 Gene3D - 510 823 IPR015943 GO:0005515
Mtr8g2310 1054 MobiDBLite consensus disorder prediction 1029 1054 - -
Mtr8g2310 1054 CDD R-SNARE_STXBP5_6 987 1044 - -
Mtr8g2310 1054 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1050 - -
Mtr8g2310 1054 SUPERFAMILY WD40 repeat-like 86 606 IPR036322 GO:0005515
Mtr8g2310 1054 SUPERFAMILY WD40 repeat-like 514 811 IPR036322 GO:0005515
Mtr8g2310 1054 MobiDBLite consensus disorder prediction 1029 1047 - -
Mtr8g2310 1054 SMART WD40_4 110 149 IPR001680 GO:0005515
Mtr8g2310 1054 SMART WD40_4 557 598 IPR001680 GO:0005515
Mtr8g2310 1054 SMART WD40_4 402 487 IPR001680 GO:0005515
Mtr8g2310 1054 SMART WD40_4 219 259 IPR001680 GO:0005515
Mtr8g2310 1054 SMART WD40_4 500 539 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2310 Mtr-Chr8 33568712 33579530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2310 - - gmx:100793138 1641.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2310 8 33568712 33579530 Mtr8g2310 8 33568712 33579530 ECH
Mtr5g0979 5 9725462 9737180 Mtr8g2310 8 33568712 33579530 PCT