Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2258 ATGCACACATCTTTAGAACACCAAGAAGAAATGGCCTTAAACAATAAATCCAAGAAACCAAACTCCCCTTCAAATTTTTATTTCTTCACAACCCTTTTATTCATTGTTCTCTTCACAATACCAGCTCTTTTTCTTCTCCACACCCCCACCACATCTTCTATTTGCACCACCTTTACATCTCACCAATCCAAAACTTGGTCAGGTGATCTTACTTTAGCTGAATTTGCATGGAACAAGCTCTCATTTTTTCAACAAAAAAAACCACTTTCACCACTCAAAATTGCTGTTTTCTCTAGAAAATGGCCTATTGGTACCACCCCAGGTGGCATGGAACGCCATGCTTACACCCTTCACACTGCTTTAGCTCAAAGAGGCCATAAAGTTCATATTTTTACATCACCCCAAGACGAAAAAACTTCGATCAAAACTCAACAAGGTTACCCTTTTATCCATTTTCATGAAGGTGAATCTGACAAGTGGAGATACAATAAAGCATTGGAACAATATCAGGAAGAGAACAAGAAAGAACCATTTGATGTTATTCATTCAGAAAGTGTTGCACTTCCTCATTATGTAGCTAGGAATCTTTCAAATCTTGTAGTGTCTTGGCATGGAATAGCACTTGAGAGTTTGCAATCAAGTATTTTTCAGGATTTAGCTAGAAGACCTGATGAACCTATTTCACCTCTTTTCAACAATAGCTTGCAGGGAATTGTTCCTAAGGTTCTGAATGAGATAAGATTCTTTAAGAGTTATGCTCATCATGTTGCTATTAGTGATAGCTGTGGTGAGATGCTAAGAGATTTCTATCAAATTCCTACAAGAAGAGTGCATGTGATTGTTAATGGGGTTGATGAGGATGAGTTTGGAGAAGATGCTGAATTGGGAAGGAAATTTAGAACCAAAATTGGGATTCCAAGCAATGCAAGTTTAGTACTTGGTGTAGCAGGGAGATTAGTTAAAGACAAAGGTCATCCTTTGCTTCATGAAGCGTATTCAAAGCTAATAACAAAACACCCTAATGTTTATTTGATTATTGCTGGTTCTGGACCATGGGGGAACAGGTACAAGGATTTAGGAAACCAAGTTCTTGTTCTAGGATCAATGAGTCCTTCCATGTTGAAAGCATTTTATAATGCTATTGACATTTTCGTCAATCCAACACTTAGGCCACAAGGGCTTGATCTTACTTTGATGGAGGCTATGATGAGTGGGAAGCCTCTTTTGGCATCAAGGTTTCCAAGCATTAAAGGTACTCTTTTGGTTGATGATGAGTATGGTTACATGTTCTCTCCTAATGTAGAGTCCCTATTGGAGGCACTTCAAGCAGTGGTAAAAGATGGACCACAGAGGCTAGCAAGGAGAGGAAAAGCTTGCCGCGAGTATGCTGCCTCAATGTTCACAGCAAAAAAGATGGCATTAGCATATGAGAGGTTATTTCTATGTATAAAAGATTCTACATTTTGTATCTACCCTTGA 1479 0.3861 MHTSLEHQEEMALNNKSKKPNSPSNFYFFTTLLFIVLFTIPALFLLHTPTTSSICTTFTSHQSKTWSGDLTLAEFAWNKLSFFQQKKPLSPLKIAVFSRKWPIGTTPGGMERHAYTLHTALAQRGHKVHIFTSPQDEKTSIKTQQGYPFIHFHEGESDKWRYNKALEQYQEENKKEPFDVIHSESVALPHYVARNLSNLVVSWHGIALESLQSSIFQDLARRPDEPISPLFNNSLQGIVPKVLNEIRFFKSYAHHVAISDSCGEMLRDFYQIPTRRVHVIVNGVDEDEFGEDAELGRKFRTKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSKLITKHPNVYLIIAGSGPWGNRYKDLGNQVLVLGSMSPSMLKAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTLLVDDEYGYMFSPNVESLLEALQAVVKDGPQRLARRGKACREYAASMFTAKKMALAYERLFLCIKDSTFCIYP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2258 492 PANTHER GLYCOSYLTRANSFERASE 11 492 - -
Mtr8g2258 492 CDD GT4_PimA-like 93 480 - -
Mtr8g2258 492 Gene3D Glycogen Phosphorylase B; 294 463 - -
Mtr8g2258 492 Pfam Glycosyl transferases group 1 312 457 IPR001296 GO:0016757
Mtr8g2258 492 PANTHER GLYCOSYLTRANSFERASE 11 492 - -
Mtr8g2258 492 Gene3D Glycogen Phosphorylase B; 92 293 - -
Mtr8g2258 492 Pfam Glycosyltransferase Family 4 108 287 IPR028098 -
Mtr8g2258 492 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 106 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2258 Mtr-Chr8 32806437 32808249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2258 11 492 Glycosyltransferase AT4G19460 64.040 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2258 - - aprc:113860121 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2258 8 32806437 32808249 Mtr8g2258 8 32806437 32808249 ECH
Mtr5g1087 5 10862819 10864560 Mtr8g2258 8 32806437 32808249 PCT