Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1087 ATGGCCTTCAACAACAAATCCAAGAAGACTAATTCACCTTCACATTTCAATTTCTGCATCACCCTTTTCTCCATTTCCTTCTTCATTATACCAACTTTTTTCCTCCTCAACAATTCCACATCAAACTCCAAATGCACCAACCTTACCAAAACTTTTTCAGGCGATCTTCGTTCAGCCGAGTTTTCATGGAACAGCCTTTCATTTTCACAACATGGCAACCCTTCACCTGTAATTCTCAAAATTGCAGTCTTTTCTAGAAAATGGCCTATGGGAACCGTTCCAGGCGGCATGGAACGCCATGCTCACACCCTTTACACCGCTTTAGCTCGCCGTGGACATCAAGTTCATGTCTTTACTTCCCCTTCAGAAGATAAAACAACAACAACAACTTCAATCTCTTCAAAAGGCTCACCTTCTTCACCTTACATTCATTTTCATGAAGGTGAGCCCGGTAAATGGCGTTACAACAAAGCATTTGAACTTTTTCTTGAAGAAAACCAAAGAGATCAACCTTTTGATGTTGTTCATTCAGAAAGTGTAGCACTTCCTCATTGGCTTGCAAAAGATCTTCCAAATCTTGTTGTATCCTGGCATGGCATAGCATTGGAAAGCTTGCAATCGAGCATTTTTCAAGACTTGGCTCGTCTACCAGATGAGCCAAGATCACAGGATTTTGAAAAAGGATTACAAGGGGTTGTTCCTAAGGTTCTAAATGAGATAAGATTCTTCAACAAATATTCTCATCATGTTGCTATTAGTGATAGTTGTGGTGAGATGTTAAGAGATGTTTACCAAATTCCAAGTAGAAGAGTTCATGTGATTCTCAATGGTGTTGACGAGGAAGATTTTAGAGAAGATGCTGAATTAGGAAAAGAGTTTAGAACCAAAATTGGGATTCCAAGTAATGCTAGTTTAGTATTTGGAGTAGCTGGAAGATTAGTAAAGGATAAAGGTCATCCATTACTTCATGAAGCATTTTCAAGGCTTATAACAAAGTACACCAATGTGTATTTGATTGTAGCTGGTTCTGGACCATGGGAGAATAGGTATAAGGATATCGGGAACCAAGTTCTTGTTCTTGGATCAATGAATCCTTCTATGTTAAGAGCATTCTATAATGCTATTGATATTTTTGTTAATCCTACATTAAGACCACAAGGACTTGATCTTACACTGATGGAGGCTATGATGATTGGAAAGCCACTTTTGGCATCAAGGTTTCCAAGCATTAAAGGTAGTATTCTTGTTGATGATGAATTTGGTTACATGTTTTCTCCAAATGTGGACTCACTTCTGGAAGAACTTGAACAAGTTGTAAAAGATGGTAAGGAGAGGCTAGAAAGGAGGGGAAATGCTTGCCGTGAATACGCAAATTCTATGTTTACTGCAAAAAAGATGGCATTAGCATATGAGAGACTATTCCTATGCATAAAAAGAGATACATTTTGTACCTATCCTTGA 1461 0.3833 MAFNNKSKKTNSPSHFNFCITLFSISFFIIPTFFLLNNSTSNSKCTNLTKTFSGDLRSAEFSWNSLSFSQHGNPSPVILKIAVFSRKWPMGTVPGGMERHAHTLYTALARRGHQVHVFTSPSEDKTTTTTSISSKGSPSSPYIHFHEGEPGKWRYNKAFELFLEENQRDQPFDVVHSESVALPHWLAKDLPNLVVSWHGIALESLQSSIFQDLARLPDEPRSQDFEKGLQGVVPKVLNEIRFFNKYSHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDEEDFREDAELGKEFRTKIGIPSNASLVFGVAGRLVKDKGHPLLHEAFSRLITKYTNVYLIVAGSGPWENRYKDIGNQVLVLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMIGKPLLASRFPSIKGSILVDDEFGYMFSPNVDSLLEELEQVVKDGKERLERRGNACREYANSMFTAKKMALAYERLFLCIKRDTFCTYP* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1087 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Mtr5g1087 486 CDD GT4_PimA-like 80 474 - -
Mtr5g1087 486 MobiDBLite consensus disorder prediction 119 143 - -
Mtr5g1087 486 Gene3D Glycogen Phosphorylase B; 78 294 - -
Mtr5g1087 486 PANTHER GLYCOSYLTRANSFERASE 1 486 - -
Mtr5g1087 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 474 - -
Mtr5g1087 486 MobiDBLite consensus disorder prediction 119 140 - -
Mtr5g1087 486 Pfam Glycosyl transferases group 1 305 447 IPR001296 GO:0016757
Mtr5g1087 486 Pfam Glycosyltransferase Family 4 95 281 IPR028098 -
Mtr5g1087 486 Gene3D Glycogen Phosphorylase B; 295 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1087 Mtr-Chr5 10862819 10864560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1087 1 486 Glycosyltransferase AT4G19460 62.374 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1087 - - gmx:100817087 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1087 5 10862819 10864560 Mtr5g1087 5 10862819 10864560 ECH
Mtr5g1087 5 10862819 10864560 Mtr8g2258 8 32806437 32808249 PCT