Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2176 ATGGCAACAAAGAAAATTCAGGAAAAAGAAGTAGAAGCTCCCATCCATGGAGATATCTTAGAGGCCACACTTTCGTACGTGCCACTCATTTACTTGGTGCCAGCCAGTTACGTGTCAAAGCAATGGAACCATGCAGTATTGAGCTCCCTCCGCCATGTCAACCCCGTGAAGCCGTGGCTCACGGTTCACACTCAAAACCCCCGAGCTCCCCACGTGACCACAACATATGCCTATGACCCACGCTCTTTAACGTGGATCCAAATTCACGCGCCACAAATTAATCACACCCCAGCTTTACGGTCATCACACTCCACGCTCCTTTACACACTTTCTCCAACTGAATTTTCCTTCTCCTTTGATCCGCTCCACCTTACGTGGAACCACGTGCCATCACCACGTGTTTGGCGTGTGGATCCCATTGTTGCACGTGTGGGAAAGTGCATCGTTGTTGCTGGTGGGGTATGTGACTTTGAGGACGATCCTTTAGCAGTGGAGATCTACGACATGGAGTCTCGTGATTGGATTCGGTGTGAATCAATGCCGGAGATGATGAAGGATACCACAGCGTCGATGTGGCTCTCTGTTGCCGTTGCCGGTGAGTTTATGCACGTGATGGAGAAAAACTCAGGCACAATGTACTCATTTGATTGTAAAATGATGACGTGGCAAGGACCTTATGATCTACGAGGAGAAGAGAGCGTATTTCACTACGAGACGGGAACATTGAAGAATCGTTTGGTGGTTGTGGGAATAGTAGGTAACGCAGAAAACATGAAAGGAGTGAAAGTGTGGGAAGTGAAAGAGAAATTAGGATTATGGTTAAAAATGGAGAAATTAGGTGTGATGCCGAGCAAAATGGTGAAGAAACTACGAGGCAACAAAAGTGAATTGTTGAATACGATTAAGTTGATTTCTATAGGAGACTTGTTGTTTGTTCATAATCCGTCAGAACCAGAAGAGATGGTGGCGTGTGAGGTTTCAAAAAAAGGAGGGTGTGAGTGGTGGAGCGTGAGAAATGCAGTGGTGAATGATGAGACAAAAATGGGAAGAATTGTATTGTGCGCCGGTGATGTGTGTTTGGAGGATTTAAAGAGCGCGGTTTTAAGGGATTGTAAATTTGAATTGAAACAACTATGA 1137 0.4573 MATKKIQEKEVEAPIHGDILEATLSYVPLIYLVPASYVSKQWNHAVLSSLRHVNPVKPWLTVHTQNPRAPHVTTTYAYDPRSLTWIQIHAPQINHTPALRSSHSTLLYTLSPTEFSFSFDPLHLTWNHVPSPRVWRVDPIVARVGKCIVVAGGVCDFEDDPLAVEIYDMESRDWIRCESMPEMMKDTTASMWLSVAVAGEFMHVMEKNSGTMYSFDCKMMTWQGPYDLRGEESVFHYETGTLKNRLVVVGIVGNAENMKGVKVWEVKEKLGLWLKMEKLGVMPSKMVKKLRGNKSELLNTIKLISIGDLLFVHNPSEPEEMVACEVSKKGGCEWWSVRNAVVNDETKMGRIVLCAGDVCLEDLKSAVLRDCKFELKQL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2176 378 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 3 367 - -
Mtr8g2176 378 Gene3D - 59 287 IPR015915 GO:0005515
Mtr8g2176 378 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 367 - -
Mtr8g2176 378 SUPERFAMILY Kelch motif 59 277 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2176 Mtr-Chr8 31918161 31919720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2176 - - gmx:100799807 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2176 8 31918161 31919720 Mtr8g2176 8 31918161 31919720 ECH
Mtr5g1731 5 19156453 19157866 Mtr8g2176 8 31918161 31919720 PCT