Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1731 ATGGCTGCCACACAAAAAGAACACCAAGAAGAAACACACATTGAAATCGATGTTTTAGAAGCTATATTCTCCCTCATGCCACTCATCGAACTTGTTCCTGCTTGTCATGTCTCAAAGGTTTGGAACCATGCTGTTTTCTCCTCACTCGCACACCTCAAACAAATCAAACCATGGCTCATAATTCTCACGCAAACCACACGCGCTTCGCGAGTGGTTACCGAACACGCTTACGACCCTCGCTCTCATGCATGGCTTCAGATTAAGCACCAACCGTTGATCACCAAAGCTAGTGAATTCCCTACCGTTAGATCATCTCATTCGACTCTTCTCTACACGTTGACCCCATCGGAGTTCACTTTTTCCATTGATGCACTTCATCTTAAATGGCACCATGCACCTTCACCGCGCGTGTGGCGCACGGACCCAATAATAGCGCGCGTTGGAAATCATGTAGTTGTCGCTGGTGGTGCGTGTGAGTTCGAGGATGATCCTCTTGCTGTAGAGATGTATAACATGGAGAGTTCTGCTTGGGTTAGATGCCAATCAATGCCGAAAAAGATGAAGAATACGTCGGCATCCACGTGGCAGTCGGTTTCTGTCGTCGGAGAAACTATGCTTGTGACGGAGAAAGATTCCGGTGTGACATACTCTTTCAATGCTATTGCAATGAAATGGGAAGGACCTTACTATCTTTGTCCTGATCAAAGTGTATTCTACTGCGTCACCGGAACTTCATCGGAGAAGTTGATGGTGGTTGGATTGGTGGGTGAAGCTGGGAATGTTAGAGAGGTGAAGCTGTGGGAGGTTAAGGATGGATTAAGTTCGGGAATGAAAGAAATCGGTTCGATGCCGAAGGAGATGGTGGAGAAGCTGAAGGGTGATTCAGAGTTTGGTTCAGTTGAAGTGATTTGGGTTGGGGATTTTGTTTACTTGCGGAACACGTTAGTACTAGAGGAGCTTGTTGTATGTGAGGTTATGAATGGAAGTTTGTGTGAGTGGAGGAGTGTGAGGAATGTGGCGGTGGACGGCGGAACAAGGATGGTGTTTTGCGGCGGTGATGTATGTATGGAGGATTTGCAGAAAGCTGTGTTGTCGGAGAAACGTAAATTTTGCATGAAATAA 1122 0.4652 MAATQKEHQEETHIEIDVLEAIFSLMPLIELVPACHVSKVWNHAVFSSLAHLKQIKPWLIILTQTTRASRVVTEHAYDPRSHAWLQIKHQPLITKASEFPTVRSSHSTLLYTLTPSEFTFSIDALHLKWHHAPSPRVWRTDPIIARVGNHVVVAGGACEFEDDPLAVEMYNMESSAWVRCQSMPKKMKNTSASTWQSVSVVGETMLVTEKDSGVTYSFNAIAMKWEGPYYLCPDQSVFYCVTGTSSEKLMVVGLVGEAGNVREVKLWEVKDGLSSGMKEIGSMPKEMVEKLKGDSEFGSVEVIWVGDFVYLRNTLVLEELVVCEVMNGSLCEWRSVRNVAVDGGTRMVFCGGDVCMEDLQKAVLSEKRKFCMK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1731 373 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 363 - -
Mtr5g1731 373 SUPERFAMILY F-box domain 16 48 IPR036047 GO:0005515
Mtr5g1731 373 Gene3D - 52 335 IPR015915 GO:0005515
Mtr5g1731 373 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 2 363 - -
Mtr5g1731 373 SUPERFAMILY Kelch motif 58 276 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1731 Mtr-Chr5 19156453 19157866 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1731 - - gmx:100805691 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1731 5 19156453 19157866 Mtr8g2176 8 31918161 31919720 PCT