Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2160 ATGGACTTTAGCTCCTCAATTATCTCACTCCTCCTACATTTTCTTCTCATTAGTTCTTTGGTTTGTCCAATTAATTCTTCAGAAACTATTCAACAGATCAACAAGCCAGCTATTAAGACAATTCAGATTTCCGATGGTGATATTATCGATTGCATTTTGACTCATAAACAACCAGCTTTTGATCATCCTTTATTGAAAGGACAAAAACCATTGGATCCTCCAGAAAGATCAAAAGGGCATAACCAAATAAGTAATTTGAGTGACATCTTTCAATTGTGGAGTTTGTCTGGTGAATCATGTCCTGAAGGAACAATTCCAATTAGAAGAACAACAGAAGAAGACATCTCAAGAGCTGGATCTATTGATAGTTTTGGAAGAAAGGCAAACGGATTTAGAACGGACACAATTCAAAATGGACATCTGCATTCAGTTGGATTTGTGAGAGGGGATATATACTATGGAGCACAGGCTATAATAAACGTGTGGGCCCCCCATGTTGAAAGCCCAAATGAATTCAGCTTGGGTCAAATATGGATCGTCTCTGGTTCTGGGAAAGATCTCAATACCATTGAAGTTGGTTGGCAGGTGAGTGCGGGTCGCTACGGGGACAATCGCCCTAGATTGTTTACCTTTTGGACTGCTGATGGATATGACCAAACCGGATGCTACGATTTACTATGCCCAGGCTTTGTTCAAACTAACAATAAATTTGCAATTGGAACTCCAATTTCTCCAATTTCTACATATAATGGAGGACAATATGAAATTACCTTATTCATCTTTAAGGATCCAACGAATGGGAGTTGGTGGCTTGAATATGGACTTGGAAACCCTATTGGATACTGGCCATCCTCTTTGTTCACAACCTTAAAAGATAATGCAACTATCGTTCAATTTGGTGGAGAAATAGTGAATGCAAAGTCAACAGGGGCTTATACATCAACCCAAATGGGTAGTGGACATTTTGCTGAGGAGGGTTATGGAAAAGCTTCATATTTTAGAAATATGCAAGTTGTAGGTTCTAAAAACTTCTTGACTCCACTATCAAATCCAACATATACAGCAGACCAACCAAATTGTTATAATGTACAAGGAAGATTTAATGACAAATGGGGTCATCACTTTTACTATGGCGGACCTGGAAGGAACGAGAAATGTCCATAA 1164 0.3875 MDFSSSIISLLLHFLLISSLVCPINSSETIQQINKPAIKTIQISDGDIIDCILTHKQPAFDHPLLKGQKPLDPPERSKGHNQISNLSDIFQLWSLSGESCPEGTIPIRRTTEEDISRAGSIDSFGRKANGFRTDTIQNGHLHSVGFVRGDIYYGAQAIINVWAPHVESPNEFSLGQIWIVSGSGKDLNTIEVGWQVSAGRYGDNRPRLFTFWTADGYDQTGCYDLLCPGFVQTNNKFAIGTPISPISTYNGGQYEITLFIFKDPTNGSWWLEYGLGNPIGYWPSSLFTTLKDNATIVQFGGEIVNAKSTGAYTSTQMGSGHFAEEGYGKASYFRNMQVVGSKNFLTPLSNPTYTADQPNCYNVQGRFNDKWGHHFYYGGPGRNEKCP* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2160 387 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 22 386 - -
Mtr8g2160 387 PANTHER PEPTIDASE, PUTATIVE (DUF239)-RELATED 22 386 - -
Mtr8g2160 387 Pfam Neprosin activation peptide 40 144 IPR025521 -
Mtr8g2160 387 Gene3D - 157 274 - -
Mtr8g2160 387 Pfam Neprosin 170 380 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2160 Mtr-Chr8 31699002 31703481 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2160 - - vun:114176782 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1379 5 14405560 14410102 Mtr8g2160 8 31699002 31703481 PCT