Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1379 ATGTGTTTCCCTTGCCACAATCAAAATCTAGGAACACACAATTTTGTTTTTGTAGATGGAAGAAGAAGACAAGATCAATGTGAACTACTTCAAACGGATTCTTCAATAGAAACAAAGAAAGGAAAATTCTTAAACATGGATTTTAGCTTGTGTTTGACTTCTCCAATCATTTACAATCTTGTACATTTTCTTCTTGTTTTTTCTTTCCTTTGTCCTGTTTTTTCTTCCTCAAAAATTGATAACAACCCTGTTGCCAATAACACTTTTAAACCAAAGGAAGAGTTGAATAGAATGAACATCATAAGATATCGTCTTCAACAGATCAATAAACCTTCTATTAAGACAATTCAGAGTCCTGACGGTGATATTATAGAATGCGTTGCGTCTCATCAACAACCAGCTTTTGATCATCCTATGTTAAAAGGACAAAGACCACTGGATCCTCCAGAAAGGCCTAAAAATCATAACAAAAGGGATGTGTTGAGTGAGAATTTTCAGTCATGGAGCTTGTCGGGTGAATCATGTCCAGAAGGAACAATTCCGATTAGAAGAACAACAGAACAAGACATGTTAAGGGCAAGTTCTATCAACACATTTGGAAGAAAATTAAGAAGACGTGTTAGAAGGGACACAAATAGCAATGGACATGAGCATGCAGTTGGATATGTGACTGGAAATCAATACTATGGAGCAAAGGCTAGCATAAACGTGTGGGCCCCACGTGTAGCAAACCAATATGAATTCAGCTTGTCCCAAATGTGGGTCATTTCTGGTTCATTTGGAGATGATCTTAACACCATTGAAGCTGGTTGGCAGGTCAGCCCTGAGCTCTATGGGGACAGTTACCCTAGATTCTTTACTTATTGGACGAGTGATGCATATCAAGCAACTGGATGCTACAATTTATTGTGTTCTGGCTTTGTTCAAACTAACAATAAAATTGCAATTGGTGCTGCAATCTCTCCAACTTCTTCATATACTGGGGGCCAATTTGATATTAGCTTGCTCATTTGGAAGGATCCAAAGCATGGAAATTGGTGGCTTGAATTTGGCTCCGGAATATTGGTAGGGTACTGGCCATCGTTTTTGTTTACACACTTAAGGGATCATGCAAGTATGGTACAATTTGGTGGAGAAATTGTGAATTCTAGACAAGGGTCACACACTTCAACTCAAATGGGTAGTGGCCATTTTGCTGGAGAAGGTTTTGGAAAAGCATCATACTTTAGGAATTTGCAAGTTGTGGATTGGGATAACAATTTGATACCATTGTCAAATCTAAGGGTTCTAGCGGATCATCCAAATTGCTATGATATACAAGGAGGAATAAATAATGTTTGGGGGAATTACTTTTACTATGGTGGACCAGGAAGAAATGTGAAATGTCCCTAA 1392 0.3822 MCFPCHNQNLGTHNFVFVDGRRRQDQCELLQTDSSIETKKGKFLNMDFSLCLTSPIIYNLVHFLLVFSFLCPVFSSSKIDNNPVANNTFKPKEELNRMNIIRYRLQQINKPSIKTIQSPDGDIIECVASHQQPAFDHPMLKGQRPLDPPERPKNHNKRDVLSENFQSWSLSGESCPEGTIPIRRTTEQDMLRASSINTFGRKLRRRVRRDTNSNGHEHAVGYVTGNQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSYTGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEIVNSRQGSHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNNLIPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVKCP* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1379 463 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 48 463 - -
Mtr5g1379 463 Gene3D - 238 352 - -
Mtr5g1379 463 MobiDBLite consensus disorder prediction 143 157 - -
Mtr5g1379 463 Pfam Neprosin activation peptide 115 222 IPR025521 -
Mtr5g1379 463 MobiDBLite consensus disorder prediction 136 157 - -
Mtr5g1379 463 PANTHER - 48 463 - -
Mtr5g1379 463 Pfam Neprosin 246 456 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1379 Mtr-Chr5 14405560 14410102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1379 - - gmx:100776639 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1379 5 14405560 14410102 Mtr5g1379 5 14405560 14410102 ECH
Mtr5g1379 5 14405560 14410102 Mtr8g2160 8 31699002 31703481 PCT