Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1943 ATGCCTTCTCCTTCCACCTTCCTCCCACTCCATCTCCTTCTCCTTTTCACCCTCTTCTATCTCCACGTTCAAGCAACGCTCGTCATTCCCGAAGAAGGTTACACCATCACCACCATACTCGACGGTCACAAGCTTCACATAAACCCTTTCTCCATTCTCCAACGACCCATTTCCTCTGATCTCATCGTTCTTGATTCTACAAACAGCACTTTCTACACTGTCCAATTACCCATTTCCCAAGAAAGTGTTTTCAAGAGGTTTTCTGGAAATGGGTCACCTGGATATGAAGATGGTGATGTGGGTTTAGCTAGGTTTGATAAACCTAGAAGCTTTGCTGTTGATTTTAGAGGGAATGTGTATGTTGCTGATAGGGTTAACAAGGTGATAAGGAAAATCAGTACTAATGGTGTCACCACAATTGCTGGTGGGTCTTCCGAAAAGTCAAGCATCAAGGATGGACCAGCACAAAATGCATCATTTTCAAATGATTTCGAGCTAACATTCATTCCGGCCCTGTGTGCCTTACTGGTGTCGGATCATATGCACCAGTTGGTCCATCAGATTAATTTGAAGGAGGAAGACTGTACCCTTGGATCTAAATCTGCGCTTGGTGCAGTTATGACATGGACTCTAGGGTTAGGACTATCTTGTATACTCGGCCTAGTGATTGGCATTGTGATCCGCCCTTACATCATCCCTCATGAACACACCAGCCGTTGCCATTTCACCGCGACATGGAAGCATTGCCAAACCAATCTGGTGAAGCTAGTACCGACACTCTACTCCGGCATCAAAAGCGCAGTTGCTAGCTGCGGTTGCTCCTCGGTTTTCACGGTCGCAGTGAGACTTTGGGAATTGAGTCTTTCTCTTCTTGTTCTCATGTTTAATATTGACTTCGTTTCTCCAAGGCGGCCGCACTTGGAGTCCGTGTCTTTGCTAGATTTAGATGCTTACAATAGTGGTGAGATATCAAAGTCAAGTAAGTATTTTGACCAATTGAAGGATTTGATGAGTTTTGATGAACACCTAATGGATTCAACCAAGGAAGCCTTAAACCAAGGAAAGGGTACCGGTGTTAGGATCGGACCTAAAGATAGTAACATTCTTCATCAAGAATCATCTGTTTCTAATTTGGGAATTGTGAAGAGGAGATGA 1155 0.4424 MPSPSTFLPLHLLLLFTLFYLHVQATLVIPEEGYTITTILDGHKLHINPFSILQRPISSDLIVLDSTNSTFYTVQLPISQESVFKRFSGNGSPGYEDGDVGLARFDKPRSFAVDFRGNVYVADRVNKVIRKISTNGVTTIAGGSSEKSSIKDGPAQNASFSNDFELTFIPALCALLVSDHMHQLVHQINLKEEDCTLGSKSALGAVMTWTLGLGLSCILGLVIGIVIRPYIIPHEHTSRCHFTATWKHCQTNLVKLVPTLYSGIKSAVASCGCSSVFTVAVRLWELSLSLLVLMFNIDFVSPRRPHLESVSLLDLDAYNSGEISKSSKYFDQLKDLMSFDEHLMDSTKEALNQGKGTGVRIGPKDSNILHQESSVSNLGIVKRR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1943 384 PANTHER NHL DOMAIN-CONTAINING PROTEIN 7 348 - -
Mtr8g1943 384 SUPERFAMILY NHL repeat 32 191 - -
Mtr8g1943 384 PANTHER - 7 348 - -
Mtr8g1943 384 Gene3D - 30 188 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1943 Mtr-Chr8 29183375 29187155 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1943 - - gmx:100816542 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1943 8 29183375 29187155 Mtr8g1943 8 29183375 29187155 ECH
Mtr5g1424 5 14984067 14988459 Mtr8g1943 8 29183375 29187155 PCT