Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1424 ATGGGTAAGCTTCATTTTGCATTGACTTTTCTTCTTCTACTTCTACTTACAAATGTCTCAGCTGCACCACCATTATTCTCATCAATTTCACCTGCAAAGATTGTTAATGGGTTTCTCTCAAATGCTGTACCTGCTTTCACCAAATGGGTGTTCTCACTTAAACCAACCACCAAAAAAGCGATTGCTGGGAAGTCAATGATGAAGTTTGAGAGTGGATACAATGTGGAAACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCAGTTGAGGTGTTGTCTAATGGGGAGCTTCTGATTCTAGATTCGGAGAATAGTAACATTTATAAGATTTCGTCTTCACTTTCTTTGTATAGCAGGCCAAAACTTGTGGCAGGATCTGCGGAAGGATATTCTGGACATGTTGATGGAAAATTAAGAGAGGCTAGGATGAACCACCCAAAGGGGATTACTGTTGATGACCGAGGAAATATCTATGTTGCAGATATTATGAATATGGCAATTAGGAAAATTAGCGATTCAGGGGTTACAACAATTGCTGGAGGAAAATTAAGCCGTGGAGGGGGCCATGTCGATGGACCAAGTGAAGAGGCTAAATTTTCTAATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCTCTACTTGTCATCGACAGGGGGAATCAAGCCATCAGGGAGATTCAGCTGCGCTTTGATGACTGTGCTTATCAATACGAAAGTGGATTTCCACTCGGAATTGCAATGCTTCTCGGAGCTGGCTTCTTTGGTTATATGCTGGCATTGCTGCAGCGTCGTCTAAGTACAATTGTTGCGTCTCAGGATATGACTCTTGCTGAGAGCTCAGCAATGTCTGACTTTTCACCGAGTCCATATCAAAAGCCATTGAAATCTGTCAGACCGCCTTTGATTCCATCAGAAGACGAATCTTATAAGCAAGAAGAAGGTCTCTTTGCATCCATTGGGAAGCTTCTTACCAATGCTGGGGCCTCAGTAGTGGAAATAATGGGTTTCAGGAAAAAACCACAAAGCTATGAATTTCAAAGCCAGCCTTTATTCCATCAACCTGAAAGGCAAATAAATGCTTGGCCCGTGCAAGAAAGTTTTGTAATTACAAATGAAGATGAGCCCCCTTCTATTGACCCGAGAACTCCAACCCCTAAGAAAACATATCCTTTCATGATTAAAGACACCGAAAAAATGCAACAGTTGTGGCAAGGTCGGGCGCTCTATAATGGATGGGAAGGAGATCTTCAGCATCAGCAGCAGCAACAACAAAAACATGTGTACAATGGATGGGAAGGAGATCTTCATCAGCAGCCGCAGCAACAACAACAGCAACCACAACAAAAACATCTGTATAACGGATGGGACGGAGATCTTCAGCAGCAGCCGCAACAAAGACAACAACAACAGCAACCACAACAAAAACATCTGTATAACGGATGGGACGGAGATCTTCAGCAGCAGCAAAAACATAATTATCGTAATCAGTATCATTCATCGGTTGCTCACACTTACTATGAGCAAAGTCATGAGGAAACCAATGAGATAGTATTTGGTGCAGTGCAGGAACAGGATGAGAAGGAGTCTGTAGTTATCAAGCCTTTGGATTACGGTGATTCTTTCTATGATCATCATAATATGCGGTCTCGAATCAGTTATATCCACAAGTACTGA 1683 0.4213 MGKLHFALTFLLLLLLTNVSAAPPLFSSISPAKIVNGFLSNAVPAFTKWVFSLKPTTKKAIAGKSMMKFESGYNVETVFDGSKLGIEPYAVEVLSNGELLILDSENSNIYKISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADIMNMAIRKISDSGVTTIAGGKLSRGGGHVDGPSEEAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLRFDDCAYQYESGFPLGIAMLLGAGFFGYMLALLQRRLSTIVASQDMTLAESSAMSDFSPSPYQKPLKSVRPPLIPSEDESYKQEEGLFASIGKLLTNAGASVVEIMGFRKKPQSYEFQSQPLFHQPERQINAWPVQESFVITNEDEPPSIDPRTPTPKKTYPFMIKDTEKMQQLWQGRALYNGWEGDLQHQQQQQQKHVYNGWEGDLHQQPQQQQQQPQQKHLYNGWDGDLQQQPQQRQQQQQPQQKHLYNGWDGDLQQQQKHNYRNQYHSSVAHTYYEQSHEETNEIVFGAVQEQDEKESVVIKPLDYGDSFYDHHNMRSRISYIHKY* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1424 560 PANTHER - 471 557 - -
Mtr5g1424 560 PANTHER - 8 429 - -
Mtr5g1424 560 Gene3D - 40 230 IPR011042 -
Mtr5g1424 560 SUPERFAMILY NHL repeat 76 231 - -
Mtr5g1424 560 MobiDBLite consensus disorder prediction 438 479 - -
Mtr5g1424 560 PANTHER NHL REPEAT PROTEIN 471 557 - -
Mtr5g1424 560 PANTHER NHL REPEAT PROTEIN 8 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1424 Mtr-Chr5 14984067 14988459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1424 - - gmx:100799483 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1424 5 14984067 14988459 Mtr8g1943 8 29183375 29187155 PCT