Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1835 ATGTCTTCCATTGAAGTTCTCCATTTATCTTCTAACTACTTTTCAGAACACATCCCAGAATACGACAACATCATCCGTCTCAAAAGCTGTTACAACAAATACTTAACAGCATCAAACCAGCCTTTACTTCTAGGCGTCATGGGTCAAAAAGTAATTCAAACACTGCCAAGGAGACTCGATTCATCTGTGGAATGGGAAGGTGCACAGGTTAAGCTGAAAACAAGATATGGGAATTTTCTTAGAGGTAATGGTGGGTTACTGCCTTGGAGAAATTCAGTTCGCTTGAGATTCATCATAGAAGTGCTACTCAGGATTGGATTCTTTGGGATGTTGATGTTCTTGAGATTCATGTTGGAAATCCTCCTCCTCCTCCTCCAATTCCTCATTCTGATTCTCTTGATTTTGGATCTTCTACTCCTTCTGCTCTTTCCTTCAAATCTGATCGGTTTTCTAGATAAGATCACAAGTGATGAAGGACCAAGTCTTAAAGCAAAAGAAGGGATCTAA 507 0.3984 MSSIEVLHLSSNYFSEHIPEYDNIIRLKSCYNKYLTASNQPLLLGVMGQKVIQTLPRRLDSSVEWEGAQVKLKTRYGNFLRGNGGLLPWRNSVRLRFIIEVLLRIGFFGMLMFLRFMLEILLLLLQFLILILLILDLLLLLLFPSNLIGFLDKITSDEGPSLKAKEGI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1835 168 Gene3D - 10 93 - -
Mtr8g1835 168 SUPERFAMILY Actin-crosslinking proteins 17 87 IPR008999 -
Mtr8g1835 168 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 9 94 - -
Mtr8g1835 168 PANTHER ACTIN CROSS-LINKING PROTEIN 9 94 - -
Mtr8g1835 168 Pfam Domain of unknown function (DUF569) 11 94 IPR007679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1835 Mtr-Chr8 27640350 27642186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1835 - - mtr:MTR_8g469730 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1835 8 27640350 27642186 Mtr8g1835 8 27640350 27642186 ECH
Mtr5g1529 5 16338026 16347242 Mtr8g1835 8 27640350 27642186 PCT