Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1529 ATGGAATATTTCACCAAATCAAAGATCATTAAGCTCAAAAGCCACCAAGATAAGTACCTTATCGCCGACGACAACAACGGAAAAGTCCGTCAAAGCCGAAACGGAGCCATTAAAAGAGCTCAATGGACAGTGGAGATAATTCAAAAACTACAAACTCATCACCACGTAATAAGGTTGAAGAGCCACAACGGAAAATATTTAACGTCAACAGAAACACCGTATCCCTTAACCCTAACAGGAAAAAGGGTAATATTAACGGAGTTAGAAAACGGTGTAGATGGTAAAAACGAATGGCAACCAATACGTGACGGGTTTCAGGTAAAGCTGAGGAGTTGTTGTGGGAGGTTTTTGAAGGGAAACGGTAGTAATCCGCCGTGGAGGAACAGTGTAACGATTGATGATTCGTTTGTGAAAATGGACGGTGTTTTGTGGGATGTTGAAGGTGTTATGGAAGATGAGTTTGAGAATTTGTTATCTTCTTTTGGTTCAGATGATGTTTCTTTTGCGTCGGATATTGCGTCGCCGATGAGTGTTTTCTCTCTTGGGTCGTCGCCGCCGGAGAGAGGAAGTTTCCAGACAACAAAGCCTAACAAGCTTCGAAGCGGAATGGACTTCTTCCACAGAGCAAAAGCAGTCCGTCTTCGCAGCCACCACGACAAATATCTCTTAGCAGAAGAAGATGAAGAATCCGTTACACAAGGCAGAAACGGTTCATCAAACAACGCAAGATGGTACGTAGAATATGTACCAAACTACGACAACGTTGTTCGTCTCAAAAGCTGTTACGGAAAATACCTAACAGCTTCGGACACTCCATTTCTCCTCGGCATGACTGGTAGAAAAGTGCTTCAAACTAGTCCAAAGACTTTGGATTCATCTGTTGAATGGGAGCCTATTAGAGATGGTGTTCGTGTGAAGCTGAAGACGAGGTATGGGAATTTTCTTAGAGGGAATGGTGGGTTGCCACCGTGGAGGAATACTGTGACGCATGATATTCCGCATAGGACTGTTACTCAAGATTGGGTTTTGTGGGATGTTGATGTTGTTGAGATTCATGTTAGTAAACAGCAACCTTCTGCTCCAGCTTTTGAAACTAGCATGCCTCCTTCTCCTGCTGTGGCGGTGGCTCCTCCTAGTGTTTCTAGAAGCTTTTCTAGACAACAGTCGAAGGATGATGCATCTCCTAGGAAGATGGAGGGGCGAATTATCTACTACTATGTTGCTGAAGATGATGCAGAAGTAAGTGATGAAGGTGTGCAGGGATATTCTTTGGTTTTCAAAGGGAATGGAGTTGAAGAATTGAGCAAGAAGTTTGAGGAAGAGACAGGGTTAGAGGGAATCATTGTGTGTACTAAGAGTCCTTTGAATGGAAAGCTTTACCCTCTTCGTTTGCAGCTTCCTCCAAATAATGTCACTATGCAGGTTGTTTTGGTTCTTCCTTTCTCAAAAGTGGCAAGAGAGTTGGAGGAACAAGGTTTGCTTTGA 1485 0.4343 MEYFTKSKIIKLKSHQDKYLIADDNNGKVRQSRNGAIKRAQWTVEIIQKLQTHHHVIRLKSHNGKYLTSTETPYPLTLTGKRVILTELENGVDGKNEWQPIRDGFQVKLRSCCGRFLKGNGSNPPWRNSVTIDDSFVKMDGVLWDVEGVMEDEFENLLSSFGSDDVSFASDIASPMSVFSLGSSPPERGSFQTTKPNKLRSGMDFFHRAKAVRLRSHHDKYLLAEEDEESVTQGRNGSSNNARWYVEYVPNYDNVVRLKSCYGKYLTASDTPFLLGMTGRKVLQTSPKTLDSSVEWEPIRDGVRVKLKTRYGNFLRGNGGLPPWRNTVTHDIPHRTVTQDWVLWDVDVVEIHVSKQQPSAPAFETSMPPSPAVAVAPPSVSRSFSRQQSKDDASPRKMEGRIIYYYVAEDDAEVSDEGVQGYSLVFKGNGVEELSKKFEEETGLEGIIVCTKSPLNGKLYPLRLQLPPNNVTMQVVLVLPFSKVARELEEQGLL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1529 494 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 150 - -
Mtr5g1529 494 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 189 483 - -
Mtr5g1529 494 SUPERFAMILY Actin-crosslinking proteins 6 123 IPR008999 -
Mtr5g1529 494 Pfam Domain of unknown function (DUF569) 203 344 IPR007679 -
Mtr5g1529 494 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Mtr5g1529 494 MobiDBLite consensus disorder prediction 359 396 - -
Mtr5g1529 494 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 150 - -
Mtr5g1529 494 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 189 483 - -
Mtr5g1529 494 Gene3D - 6 136 - -
Mtr5g1529 494 Gene3D - 211 329 - -
Mtr5g1529 494 SUPERFAMILY Actin-crosslinking proteins 207 349 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1529 Mtr-Chr5 16338026 16347242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1529 - - gmx:100797561 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1529 5 16338026 16347242 Mtr5g1529 5 16338026 16347242 ECH
Mtr5g1529 5 16338026 16347242 Mtr8g1835 8 27640350 27642186 PCT