Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1805 ATGGTGAAGGGTCCTGGTCTTTACTCCGATATCGGAAAGAGAGCACGAGATCTTCTTTTCAAAGATTATCAGAATGATCACAAGTTCACAATCACAACTCAAACTTTAGCTGGAGTGGAAATTACTTCAGCTGGAGTCAGGAAAGGTGAGGCATTTTTGGCTGATGTGAGTACCAAGGTGAAGAACAAGAACGTCACTACTGATATCAAAGTGGACACTAACTCAAATCTGCGCACAACCATTACTGTGGATGAAACAGTGCCTGGACTCAAGACTATTTTTAGCTTCATTTATCCAGAGCAAAAATCTGGCAAGGTGGAACTACAGTACCTTCATGATTATGCTGGGATCAGTACAAGTATTGGGTTGACAGCAACTCCCACTGTTAACATCTCTGCTGTGCTTGGAAATAATTTGGTTTCTGTTGGATCAGATGTTTCCTTTGAGACTTCTTCTGGCTCCTTGAACAAGTGCAATTTTGGGTTGAATGTTACTCATGCTGACCTTATTGCTTCTCTGACTGTCAATGATAGAGGTGATTCCCTCAATGCCTCGTATTACCATGTTGTGAGCCCACTGACAAACACTGCTGTTGGGGCGGAGCTTTCACACTCCTTTTCCAGCAATGAGAATGTACTAACCATTGGCACACAACATGCTCTTGACCCAGTAACCTTGTTGAAAGCTAAGGTGAACAATTATGGTAAGGCAAGTGCTCTGATCCAGCATGACTGGAGCCGACAAGCACGTTTCTCTCTTGTTGGGGAAGTTGATACTGCTGCCATTCAGAAGACTGCAAAGGTTGGTCTTGCTTGTGCCTTGAAGCCTTAG 831 0.4368 MVKGPGLYSDIGKRARDLLFKDYQNDHKFTITTQTLAGVEITSAGVRKGEAFLADVSTKVKNKNVTTDIKVDTNSNLRTTITVDETVPGLKTIFSFIYPEQKSGKVELQYLHDYAGISTSIGLTATPTVNISAVLGNNLVSVGSDVSFETSSGSLNKCNFGLNVTHADLIASLTVNDRGDSLNASYYHVVSPLTNTAVGAELSHSFSSNENVLTIGTQHALDPVTLLKAKVNNYGKASALIQHDWSRQARFSLVGEVDTAAIQKTAKVGLACALKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1805 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
Mtr8g1805 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Mtr8g1805 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mtr8g1805 276 Gene3D Porin 1 275 IPR023614 -
Mtr8g1805 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mtr8g1805 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1805 Mtr-Chr8 27152148 27155374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1805 K15040 - gmx:100787662 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1805 8 27152148 27155374 Mtr8g1805 8 27152148 27155374 ECH
Mtr8g1805 8 27152148 27155374 Mtr4g3891 4 52682038 52684592 ECH
Mtr8g1805 8 27152148 27155374 Mtr7g0124 7 2250120 2254867 ECH
Mtr8g1805 8 27152148 27155374 Mtr6g0261 6 3136145 3140387 ECH