Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0261 ATGTCAAAGGGTCCAGGTCTCTACTCTGACATCGGCAAAAAAGCCAGAGATCTTCTTTACAAGGATTACAACACTGACCAGAAGTTCACTCTCACTACTTATTCACCTACTGGAATTGCTTTGACTGCTTCAAGTACCAAGAAAGGCGAGCTTTTTTTGGCTGATATTAACACACAGTTGAAGCACAAGAATGTCACTACTGATATCAAAGTGGACACAGATTCTAATCTCTTCACAACGATCACTGTTACTGAGCCAGCTCCTGGTCTCAAGACTATTCTTAGCTTCAGGATTCCTGAACCTGAACTAAAGTCTGGAAAGGCTGAAGTTCAGTACTTGCATGACTATGCTGGAATTTCTGCCAGCATTGGGTTGACAGCAAACCCAGTTGCCAACTTTTCTGGTGTTATTGGAAATAATGTAGTTGCTCTTGGTGGTGATCTTTCTTATGACACTAAAACTGGCGTGTTCACAAGGCTTAATGCTGGGCTGAACTTCACCAAAGACGATTTGATTGCTTCGTTGACTCTGAATGAAAAAGCTAATGCCCTGAATGCTTCATACTACCATGTCGTCAATCCCGTTACCAAAACAGCTGTTGGAGCTGAGGTATCACATCGATTCTCGACCAAAGAAAACACGCTCACACTTGGCACTCAGCATGCAATAGACTCATTGACCACAGCGAAGCTTCGATTCAACAACTTCGGACTAGCAAGCGGTCTCATCCAGCATGAGTGGCGTCCAAAATCATTCTTCACCATTTCTGGTGAGGTGGACACCAAGGCCATTGAGAAGAGTGCAAGAATTGGAATAGCTTTGGCTCTCAAACCTTGA 837 0.4373 MSKGPGLYSDIGKKARDLLYKDYNTDQKFTLTTYSPTGIALTASSTKKGELFLADINTQLKHKNVTTDIKVDTDSNLFTTITVTEPAPGLKTILSFRIPEPELKSGKAEVQYLHDYAGISASIGLTANPVANFSGVIGNNVVALGGDLSYDTKTGVFTRLNAGLNFTKDDLIASLTLNEKANALNASYYHVVNPVTKTAVGAEVSHRFSTKENTLTLGTQHAIDSLTTAKLRFNNFGLASGLIQHEWRPKSFFTISGEVDTKAIEKSARIGIALALKP* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0261 278 CDD Porin3_VDAC 5 277 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mtr6g0261 278 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 278 - -
Mtr6g0261 278 Gene3D Porin 1 277 IPR023614 -
Mtr6g0261 278 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 278 IPR001925 GO:0005741|GO:0008308|GO:0098656
Mtr6g0261 278 Pfam Eukaryotic porin 4 271 IPR027246 GO:0005741|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0261 Mtr-Chr6 3136145 3140387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0261 K15040 - gmx:100170728 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0261 6 3136145 3140387 Mtr4g3891 4 52682038 52684592 ECH
Mtr6g0261 6 3136145 3140387 Mtr6g0261 6 3136145 3140387 ECH
Mtr7g0124 7 2250120 2254867 Mtr6g0261 6 3136145 3140387 ECH
Mtr8g1805 8 27152148 27155374 Mtr6g0261 6 3136145 3140387 ECH