Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1731 ATGGCATCACAAAACCCACCACAGTCTCATTTCTATGATCACCTTCCTTTCATGGCAAACAAGTTAGGTGGAGATGGCTTGATAGATGAACTATGTAACGGGTTCAATCTTTTGAAGGATTCTAATAAAGGTGTCATTACTTTTGAAAGCCTAAAAATGAATTCAGCTTTGCTAGGGTTAAATGGTTTCAGCGATGAAGATCTTTTGTCTATGCTAATGGAAGGTGATTTTGATGGAGATGGTGCTCTTAACCAAATGGAGTTTTGTGTCTTGATGTTTAGATTGAGCCCTGAACTTATGGAGGGCTCTAAATTGTGGTTGGAAGAGACCCTTCAACATCAATTTTGA 348 0.3851 MASQNPPQSHFYDHLPFMANKLGGDGLIDELCNGFNLLKDSNKGVITFESLKMNSALLGLNGFSDEDLLSMLMEGDFDGDGALNQMEFCVLMFRLSPELMEGSKLWLEETLQHQF* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1731 115 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Mtr8g1731 115 Gene3D - 8 115 - -
Mtr8g1731 115 PANTHER CALCIUM-BINDING PROTEIN KIC 5 115 IPR044205 GO:0005509
Mtr8g1731 115 Pfam EF-hand domain pair 43 94 IPR002048 GO:0005509
Mtr8g1731 115 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Mtr8g1731 115 PANTHER CALCIUM-BINDING PROTEIN KRP1 5 115 - -
Mtr8g1731 115 SUPERFAMILY EF-hand 8 92 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1731 Mtr-Chr8 25757240 25757587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1731 3 115 EF-hand Containing Proteins AT4G27280 62.281 1.98e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1731 K24345 - gmx:100527035 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2717 2 40339266 40339902 Mtr8g1731 8 25757240 25757587 PCT