Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2717 ATGGCTTCACAAAATACTCAAGTTCAATTTCAAGACTCATTACCCTTGATGGCAAACAAGCTTGGTGGTGATGGATTAATAGATGAATTATGCAATGGTTTCAATCTTTTGATGGATTCTACTAAAGGTGTCATTACTTTTGAAAGCCTTAAGAAGAATTCAGCTTTGCTTGGGTTACAAGATTTGACCGATGTGGAACTTCAATCCATGATTGTTGAAGGTGATTTTGATGGTGATGGTGCTCTTAATCAAATGGAGTTTTGTGTTTTGATGTTTAGACTTAGTCCTGAACTTATGGATGGGTCTAAGATGTGGTTAGAACAAATGCTTCAACAAGAAGTCCAAGATTCTTTCTAA 357 0.3585 MASQNTQVQFQDSLPLMANKLGGDGLIDELCNGFNLLMDSTKGVITFESLKKNSALLGLQDLTDVELQSMIVEGDFDGDGALNQMEFCVLMFRLSPELMDGSKMWLEQMLQQEVQDSF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2717 118 SUPERFAMILY EF-hand 4 91 IPR011992 -
Mtr2g2717 118 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Mtr2g2717 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Mtr2g2717 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Mtr2g2717 118 Gene3D - 7 117 - -
Mtr2g2717 118 SMART efh_1 66 94 IPR002048 GO:0005509
Mtr2g2717 118 PANTHER CALCIUM-BINDING PROTEIN KIC 1 116 IPR044205 GO:0005509
Mtr2g2717 118 PANTHER CALCIUM-BINDING PROTEIN KRP1 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2717 Mtr-Chr2 40339266 40339902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2717 4 113 EF-hand Containing Proteins AT4G27280 64.865 1.15e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2717 K24345 - gmx:100500465 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2717 2 40339266 40339902 Mtr2g2717 2 40339266 40339902 ECH
Mtr2g2717 2 40339266 40339902 Mtr8g1731 8 25757240 25757587 PCT