Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1097 ATGGGTTTGATTTCTGGGATTTTTATGGGGATGCTATTTGGCATAGCATTGATGGCAGGATGGGCTCGTATGATGAGGTATAGAAGTGCCAAGAGAATTGCAAAGGCTGTTGACATCAAAATCCTTGGATCCCTCAACAGAGAAGATTTAAAGAAAATTTGTGGGGAGAATCTTCCTGAATGGATATCTTTTCCTGTATATGAGCAGGTGAAATGGCTAAACAAGCTCCTGAGCAAGCTTTGGCCATTTGTAGCAGAAGCCGCAACAATGGTGATCAAGGAATCTGTTGAACCTCTACTGGAAGAGTACAGACCTCCTGGAATTACTTCATTGAAGTTCAGCAAGCTGTCACTTGGAAACGTAGCTCCAAAAATTGAAGGTATTCGTGTGCAGAGTCTTACCAAAGGTCAAATCATAATGGACGTAGATCTCCGCTGGGGTGGTGATCCCAGTATTATTTTGGCTGTCGAAGCTGCCCTTGTTGCATCAATCCCTATTCAGTTGAAGGATCTAAAAGTTTTCACCATTGCCCGTGTTATATTCCAACTTGCTGAAGAGATCCCTTGCATTTCTGCTGTTGTTGTTGCTCTTCTTGCTGAGCCAAAGCCGAGAATTGATTATACTCTGAAAGCTGTTGGTGGAAGTTTAACTGCTCTTCCTGGAATTTCAGATATGATTGATGATACTGTGAACACAATTGTTACTGATATGCTCCAATGGCCACATAGGATTGTTGTTCCACTTGGTGGTATCCCTGTTGATATTAGTGACTTGGAGCTTAAACCTCATGGAAGCCTTAAAGTGACTATTGTGAAAGCGACCGATTTAAAAAATATGGAAATGATTGGAAAATCTGATCCTTATGTTGTTCTGTACATTCGACCTTTATTCAAGGTTAAAACCAAGGTTATTAACAACAACTTGAATCCTGTTTGGGATCAAACATTTGAGTTGATTGCAGAAGACAAGGAGACCCAGTCACTCATTCTTGAGGTTTTTGATGAAGACATTGGGCAAGATAAGCGACTGGGAATCGTAAAATTACCCCTTATTGAATTGGAAGTACAAACTGAAAAAGAGCTTGAATTGAGGCTGCTGTCATCGCTTGATACACTCAAGGTGAAAGATAAGAAGGATCGAGGAACCTTGACCGTAAAGGTCCTGTATTACCAATTTAACAAAGAGGAACAATTGGCTGCACTAGAAGCAGAAAAAGCTATATTAGAAGAAAGGAAGAAACTGAAAGCTGCCGGCGTCATAGGTAGCACAATGGATGCAGTAGGGTCAGGTGTTGGACTAGTCGGAAGTGGCATTGGACTAGTCGGAACTGGCATTGGCGCCGGAGCTGGACTTGTCGGAAGCGGCATTGGTGCTGGAGCTGGACTTGTTGGCAGTGGTTTTGGAGCCTTTGGTAGCGGACTTAGCAAGGCAGGAAAGTTTATGGGAAGGACCATAACAGGTCATAGTGGTTCTAGAAGGAGTGGTTCGTCAACTCCAGTTCATAATCCACAGGAAAATGGTAGTCCAAAAAAGACTCAATAA 1542 0.4248 MGLISGIFMGMLFGIALMAGWARMMRYRSAKRIAKAVDIKILGSLNREDLKKICGENLPEWISFPVYEQVKWLNKLLSKLWPFVAEAATMVIKESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLTKGQIIMDVDLRWGGDPSIILAVEAALVASIPIQLKDLKVFTIARVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVNTIVTDMLQWPHRIVVPLGGIPVDISDLELKPHGSLKVTIVKATDLKNMEMIGKSDPYVVLYIRPLFKVKTKVINNNLNPVWDQTFELIAEDKETQSLILEVFDEDIGQDKRLGIVKLPLIELEVQTEKELELRLLSSLDTLKVKDKKDRGTLTVKVLYYQFNKEEQLAALEAEKAILEERKKLKAAGVIGSTMDAVGSGVGLVGSGIGLVGTGIGAGAGLVGSGIGAGAGLVGSGFGAFGSGLSKAGKFMGRTITGHSGSRRSGSSTPVHNPQENGSPKKTQ* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1097 513 Coils Coil 391 411 - -
Mtr8g1097 513 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 509 - -
Mtr8g1097 513 MobiDBLite consensus disorder prediction 482 513 - -
Mtr8g1097 513 PRINTS C2 domain signature 281 293 IPR000008 -
Mtr8g1097 513 PRINTS C2 domain signature 306 319 IPR000008 -
Mtr8g1097 513 PRINTS C2 domain signature 328 336 IPR000008 -
Mtr8g1097 513 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 509 IPR045050 GO:0008289
Mtr8g1097 513 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 392 IPR035892 -
Mtr8g1097 513 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Mtr8g1097 513 SMART C2_3c 265 362 IPR000008 -
Mtr8g1097 513 CDD C2 266 359 - -
Mtr8g1097 513 Pfam C2 domain 264 360 IPR000008 -
Mtr8g1097 513 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Mtr8g1097 513 MobiDBLite consensus disorder prediction 487 513 - -
Mtr8g1097 513 Gene3D C2 domain 260 416 IPR035892 -
Mtr8g1097 513 ProSiteProfiles C2 domain profile. 247 363 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1097 Mtr-Chr8 13406166 13417094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1097 266 354 Lipid Metabolism Gene Families AT4G00700 40.449 1.39e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1097 - - gmx:100777838 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1097 8 13406166 13417094 Mtr8g1097 8 13406166 13417094 ECH
Mtr7g1902 7 35131305 35139021 Mtr8g1097 8 13406166 13417094 PCT