Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1902 ATGGGTTTGTTTTTTGGGATTTTTCTGGGAGTATTATTCGGTGTAGCATTGATGGCTGGATGGGAACGAATGATGACATACAGAAGCCGTAAGAGAATTGCAAAGGCAGTTGACATTAAACTCCTTGGATCCCTTAATAGAGACGACTTAAAGAAAATTTGTGGTGAAAATTTACCTGAATGGATATCTTTCCCTGTATATGAGCAGGTGAAATGGCTAAACAAGCAGCTCTCCAAATTGTGGCCATTTGTGGCAGATGCAGCAACTATGGTGATAAGAGAATCTGTTGAACCGTTATTAGAAGAGTATAGACCTCCTGGAATTTCTTCGTTGAAGTTCAGTAAGCTGTCCCTTGGAACTGTCGCTCCAAAAATTGAAGGCATTCGTGTTCAGAGTCTTAAAAAAGGTCAAATCATAATGGACATTGATTTCCGTTGGGGTGGTGATCCTAATATTGTTTTGGGCGTTGAAGCACTTGTTGCGTCAATTCCTATTCAGTTGAAGGATCTCCAGGTTTTCACCATTATCCGTGTCATATTCCAACTCGCAGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAGCCTAGAATTGATTACACTCTGAAGGCAGTTGGTGGAAGTTTGACGGCACTTCCTGGACTTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACCGATATGCTCCAATGGCCTCATCGGATTGTTGTTCCACTTGGTGGTACTCCTGTGGATACTAGTGATCTGGAGCTTAAACCCCAGGGACTGCTTAAAGTGACTGTAATGAAAGCAAATGATCTAAAGAACATGGAAATGATTGGGAAGTCTGATCCTTACGTAGTTGTGCATATTCGACCACTGTTTAAAGTCAAAACAAAGGTTATTGATAACAACTTGAATCCAATTTGGAATGAGGAATTTGACTTGATTGCAGAAGACAAGGAGACCCAGTCACTCACTCTTGAGGTTTTTGATAAAGACATTGGGCAAGATAAACGATTGGGAGTAGCAAAATTGCCACTTATTAACCTGGAAGCAGAAACTGAAAAGGAAATTGAACTGAGGCTTCTGTCATCGCTTGATACATTGAAAGTAAAAGATAAGAAGGATCGAGGAACCTTGAGAATAAAGTATTTCTATCATGAATTTAACAAGGAAGAACAGATGGCTGCACTAGAAGCAGAGAAAATGACACTAGAACAAAGGAAGAAACTGAAAGAGGAAGGAGTTATTGGAAGTACAATGGACGCACTAGACGGAGCAGCATCAGTAGTTGGTTCTGGTGCTGGACTTGTAGGAAGTGGGATTGGTGCTGGAGATGGAATGGTGGGACACGGATTTGGTGCTGGAGCTGGAATTGTTGGCAGTGGGCTTGGTGCCGTAGGCAGTGGACTGAGCAGGGCAGGAAAGTTCATGGGCAGGACAATCACAGGGCAATCTGCATCAAGAAGGAGTGCCAGCGGTTCATCTACTCCTGTCTTTAATGTGGAGGAAAGTGGGGGTGGCGCAAAGCCACGGTAA 1545 0.4285 MGLFFGIFLGVLFGVALMAGWERMMTYRSRKRIAKAVDIKLLGSLNRDDLKKICGENLPEWISFPVYEQVKWLNKQLSKLWPFVADAATMVIRESVEPLLEEYRPPGISSLKFSKLSLGTVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPNIVLGVEALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGLSDMIDDTVNSIVTDMLQWPHRIVVPLGGTPVDTSDLELKPQGLLKVTVMKANDLKNMEMIGKSDPYVVVHIRPLFKVKTKVIDNNLNPIWNEEFDLIAEDKETQSLTLEVFDKDIGQDKRLGVAKLPLINLEAETEKEIELRLLSSLDTLKVKDKKDRGTLRIKYFYHEFNKEEQMAALEAEKMTLEQRKKLKEEGVIGSTMDALDGAASVVGSGAGLVGSGIGAGDGMVGHGFGAGAGIVGSGLGAVGSGLSRAGKFMGRTITGQSASRRSASGSSTPVFNVEESGGGAKPR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1902 514 ProSiteProfiles C2 domain profile. 246 364 IPR000008 -
Mtr7g1902 514 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 509 - -
Mtr7g1902 514 CDD C2 265 359 - -
Mtr7g1902 514 Coils Coil 390 417 - -
Mtr7g1902 514 PRINTS C2 domain signature 280 292 IPR000008 -
Mtr7g1902 514 PRINTS C2 domain signature 305 318 IPR000008 -
Mtr7g1902 514 PRINTS C2 domain signature 327 335 IPR000008 -
Mtr7g1902 514 SMART C2_3c 264 361 IPR000008 -
Mtr7g1902 514 Gene3D C2 domain 258 417 IPR035892 -
Mtr7g1902 514 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 509 IPR045050 GO:0008289
Mtr7g1902 514 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 248 IPR031468 GO:0008289
Mtr7g1902 514 MobiDBLite consensus disorder prediction 485 504 - -
Mtr7g1902 514 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 247 IPR039010 -
Mtr7g1902 514 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 263 392 IPR035892 -
Mtr7g1902 514 MobiDBLite consensus disorder prediction 485 514 - -
Mtr7g1902 514 Pfam C2 domain 264 359 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1902 Mtr-Chr7 35131305 35139021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1902 248 349 Lipid Metabolism Gene Families AT3G61300 33.010 4.10e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1902 - - mtr:MTR_7g075790 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1902 7 35131305 35139021 Mtr7g1902 7 35131305 35139021 ECH
Mtr7g1902 7 35131305 35139021 Mtr8g1097 8 13406166 13417094 PCT