Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0993 ATGGAAGGTGAACATCCTGACAGGTATGCAGTGGTGACAGGTGCAAACAAAGGAATTGGGTTAGAGATAGTAAAGCAGTTAGCTTCAGCTGTAATCAAAGTGGTGCTTACATCAAGAGATGAGAAAAGAGGTCTTCATGCTTTGGAAACACTTAAAGCTTCTGGTCTTTCTGATTTTGTTGTATTTCATCAACTAGATGTTGCTGATGCTTCAAGTGTAGCATCTCTTGCAGATTTTGTCAAATCTCAATTTGGAAAACTTGATATTCTGGTTAACAATGCAGGGATTGGCGGAGTTGAAATTAAAGATAGTGATTTATTCACTTCAGCCATCATTACAAACGGGGCACTACCTGATGAAGAATTGAGAAGGGCAGTAACACAAACATATGAGTCAGCTAAAGAATGCATCCAAATAAATTATTATGGGGCTAAGAGAACATTTGAATACCTTCTTCCCCTCCTTCAACTATCTGATTCACCAAGAGTAGTCAATGTATCATCTGGAGCGGGCAAGATAGAGAGTGTATCAAATGAGTGGGCTAAAGGAGTCTTCAGTGATGTTGAAAATCTTACAGATGAGAGAATAGATGAAGTAATAAAGGAGTTTATCAAAGATTTTGAACAAGGGTCCTTAGAAAGAAAAGGTTGGCCTAGGTTTATAGCTCCCTATACTATTGCTAAAGCTTCTATGAATGCCTACACAAGAATTACTGCAAAGAAGTATCCTAACTTCTGCATCAATTGTGTTTGCCCTGGTTATGTCAAAACCGATATAACTGCTAATACCGGTTTCTTCACGGTAGAAGAAGGTGCTGCTCATCCGGTTAGGTTAGCATTACTTCCCAGCGGTAGTCCATCTGGCCACTTCTATGTTCGGAACGAAGCCTCTTCATTTTGA 900 0.3944 MEGEHPDRYAVVTGANKGIGLEIVKQLASAVIKVVLTSRDEKRGLHALETLKASGLSDFVVFHQLDVADASSVASLADFVKSQFGKLDILVNNAGIGGVEIKDSDLFTSAIITNGALPDEELRRAVTQTYESAKECIQINYYGAKRTFEYLLPLLQLSDSPRVVNVSSGAGKIESVSNEWAKGVFSDVENLTDERIDEVIKEFIKDFEQGSLERKGWPRFIAPYTIAKASMNAYTRITAKKYPNFCINCVCPGYVKTDITANTGFFTVEEGAAHPVRLALLPSGSPSGHFYVRNEASSF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0993 299 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 8 299 - -
Mtr8g0993 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 IPR002347 -
Mtr8g0993 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Mtr8g0993 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Mtr8g0993 299 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 211 239 IPR020904 GO:0016491
Mtr8g0993 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 8 299 - -
Mtr8g0993 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 285 IPR036291 -
Mtr8g0993 299 Gene3D - 2 299 - -
Mtr8g0993 299 Pfam short chain dehydrogenase 9 175 IPR002347 -
Mtr8g0993 299 PRINTS Glucose/ribitol dehydrogenase family signature 9 26 IPR002347 -
Mtr8g0993 299 PRINTS Glucose/ribitol dehydrogenase family signature 85 96 IPR002347 -
Mtr8g0993 299 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Mtr8g0993 299 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Mtr8g0993 299 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0993 Mtr-Chr8 12042894 12068396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0993 10 175 Miscellaneous Gene Families AT2G29150 32.934 4.64e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0993 K15095 - gmx:100801677 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0993 8 12042894 12068396 Mtr8g0993 8 12042894 12068396 ECH
Mtr7g1947 7 35582101 35589412 Mtr8g0993 8 12042894 12068396 PCT