Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1947 ATGGCAGAAGCAAAACTAAGGAATGCTGTTGTTACTGGCTCAAATAAAGGGATAGGATTTGAGACTGTTAAAATGTTGGCCTCAAATGGTGTCAAGGTGATGCTCACAGCTAGAGATGAGAAAAAGGGGAATGAAGCCATTCAGAAATTGAAACAGTTTGGTCTCTCTGACCAAGTTATGTTTCACCAACTTGATGTCACTGACCCTGCTAGTATTACTTCACTGGTAGAATTTGTTAAGACACAGTTTGGGAGACTTGATATCTTGGTGAACAATGCAGGAGTTAGTGGTGTCAATCCATATGAAACGGTGGGATCAACAGTTGATTGGGAGAAACTGACACAAACTAGTGACATGGCTGAAAATTGCCTCAGAACAAACTACTATGGTGTTAAGGAAACAACTGAGGCCTTTCTTTCCCTTCTCAAGTTATCCAATTCTCCCAAGATTATTAATGTTTCCTCCCAAGCAGCATTATTGCAGAATATACCAAATCAATGGGCTAAAAGGGTGTTTGATGATATTGAAAATCTTACAGAAGAGAGAATAGATAAAGTACTAATAGAGTTTATCAAAGATTTCAAAGAAGGTTCACTAGAAAACAAAGGGTGGCCAACCTTCTTGTCAACCTATATTGTCTCAAAAGCAGCAACAAATTCTTACACAAGGATTCTAGCCAAGAAGTATCCAAACATGTGCATCAATTGTGTGTGTCCTGGTTATGTGAAAACAGACCTCACCAAAAACATTGGCATGTTATCTGTTGACCAAGGTGCTGCTAGTGTTGTGAGATTAGCACTGCTTCCTGATGGTTCCCCTTCTGGCCTCTTCTTTATTAGGGAAGAAATGTCAAACTTTTGGTATGCAGTTGTTACTGGGTCAAACAAAGGGATAGGATTTGAGACTGTTAAAATGTTGGCCTCAAATGGTGTCAAGGTGGTGCTTACAGCTAGAGATGAGAAAAAAGGGAATGAAGCCATTCAGAAATTGAAACAGTTTGGTCTCTCTGACCAAGTTATGTTTCACCAACTTGATGTCACTGACTCTGCTAGTATTACTTCACTTGTGAACAATGCAGGAGTTAGTGGTGTCAATCCATATGAAACGGTGGGATCAACAGTTGATTGGGAGAAACTGACACAAACTAGTGACATGGCTGAAAATTGCCTCAGAACAAACTACTATGGTGTTAAGGAAACAACTGATGCCTTTCTTCCCCTTCTCAAGTTATCCAATTCTTCCAAGATTGTTAATGTTTCCTCCCAAGCAGCATTATTGAAGAATATACCAAATCAATGGGCTAAAAGGGTGTTTGATGATATTGAAAATCTTACAGAAGAGAAAATAGATGAGGTACTAAAAGAGTTTATCAAAGACTTCAAAGAAGGTTCACTAGAAAACAAAGGGTGGCCAACAATCATGTCTGCCTATATTATCTCAAAAGCAGCCATGAATTCTTACACAAGAATTCTAGCCAAGAAGTATCCAAACATGTGCATCAATTGTGTGTGTCCTGGTTTTGTTAAAACAGACATCAACAAAAACACTGGCATGTTACCTGTTGACCAAGGTGCTGCTAGTGTTGTGAGATTAGCTCTGCTTCCTGATGATTCCCCTTCTGGCCTCTTCTTTATTAGGGAAGAAATATCAAACTTTTGA 1659 0.3906 MAEAKLRNAVVTGSNKGIGFETVKMLASNGVKVMLTARDEKKGNEAIQKLKQFGLSDQVMFHQLDVTDPASITSLVEFVKTQFGRLDILVNNAGVSGVNPYETVGSTVDWEKLTQTSDMAENCLRTNYYGVKETTEAFLSLLKLSNSPKIINVSSQAALLQNIPNQWAKRVFDDIENLTEERIDKVLIEFIKDFKEGSLENKGWPTFLSTYIVSKAATNSYTRILAKKYPNMCINCVCPGYVKTDLTKNIGMLSVDQGAASVVRLALLPDGSPSGLFFIREEMSNFWYAVVTGSNKGIGFETVKMLASNGVKVVLTARDEKKGNEAIQKLKQFGLSDQVMFHQLDVTDSASITSLVNNAGVSGVNPYETVGSTVDWEKLTQTSDMAENCLRTNYYGVKETTDAFLPLLKLSNSSKIVNVSSQAALLKNIPNQWAKRVFDDIENLTEEKIDEVLKEFIKDFKEGSLENKGWPTIMSAYIISKAAMNSYTRILAKKYPNMCINCVCPGFVKTDINKNTGMLPVDQGAASVVRLALLPDDSPSGLFFIREEISNF* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1947 552 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 288 552 - -
Mtr7g1947 552 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 7 286 - -
Mtr7g1947 552 Pfam short chain dehydrogenase 289 427 IPR002347 -
Mtr7g1947 552 Pfam short chain dehydrogenase 8 161 IPR002347 -
Mtr7g1947 552 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mtr7g1947 552 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Mtr7g1947 552 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 477 496 IPR002347 -
Mtr7g1947 552 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 288 538 IPR036291 -
Mtr7g1947 552 Gene3D - 3 286 - -
Mtr7g1947 552 Gene3D - 287 552 - -
Mtr7g1947 552 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mtr7g1947 552 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mtr7g1947 552 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Mtr7g1947 552 PRINTS Glucose/ribitol dehydrogenase family signature 211 230 IPR002347 -
Mtr7g1947 552 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Mtr7g1947 552 CDD carb_red_PTCR-like_SDR_c 7 286 IPR045313 GO:0016616
Mtr7g1947 552 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 272 IPR036291 -
Mtr7g1947 552 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 288 552 - -
Mtr7g1947 552 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1947 Mtr-Chr7 35582101 35589412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1947 290 517 Acyl Lipid Metabolism Gene Families AT1G24360 19.748 6.20e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1947 K15095 - jre:109004875 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1947 7 35582101 35589412 Mtr7g1947 7 35582101 35589412 ECH
Mtr7g1947 7 35582101 35589412 Mtr8g0993 8 12042894 12068396 PCT
Mtr8g0995 8 12058837 12062338 Mtr7g1947 7 35582101 35589412 PCT