Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0988 ATGACAGAAGCATCAAAAAGGTATGCACTTGTAACAGGAGCTAATAAGGGAATTGGTTATGGGATATGCAAGAAATTGGCTTCAAGTGGTGTTATGGTAGTGCTTACTGCTAGAAATGAGAAAAGAGGTTTAGATGCTGTAGAAAGTTTGAAAGAGTTAGGTCTTTCTGACTTTGTGGTTTTTCATCAACTTGATGTCACTGACCCTACAAGTGTTTCTTCTTTAGTTGAGTTCATCAAAATCCAATTTGGGAAGCTTGATATCTTGGTGAACAATGCTGGTGTTGCTGGAGGAATAGTGAATGGAGAGAATGTTGTTAAACAGGTAAGGGGTGAAATATCTGATTGGAATTTAGCACTGCGTCAAACTTATGAATTAGCCGAAGAATGTGTTGAAATAAACTTCTTTGGTGCTGAAAGAGTAACTGAAGCTCTTATTCCCCTGCTCCAGTTATCTACTTCACCTAGAATTGTCAATGTCTCCTCTAGACGTGGAAAATTCAAGTTTATGCCAAATGAGTGGGCAAGAGGAGTATTTGATGACATCAATAACGTTACAAATGAAAAACTTGGTGAAGTGCTTAGAGAGTTTCTGAAAGATTACAAAGAAGGAGCATTGGAAACAAAAAATTGGCCAACGTTTGTTTCTGGTTACACAATGGCAAAAGCAGCTTTAAATTCTTACACAAGGTTGCTAGCTTTGAAGCTCCCTCGTTTCCGCATAAATTGTTTATGCCCTGACTTTGTTAAGACTGATATTAATGAGATGAAAGGGTTTTTAAGCATTGATGAAGGCGCTGAATGTCCTGTTAACCTAGCATTGTTGCCAGATGATGGCCCTTCTGGTCTATTTTTTTTACATGATGAAGTTATTTCATATTAA 882 0.3753 MTEASKRYALVTGANKGIGYGICKKLASSGVMVVLTARNEKRGLDAVESLKELGLSDFVVFHQLDVTDPTSVSSLVEFIKIQFGKLDILVNNAGVAGGIVNGENVVKQVRGEISDWNLALRQTYELAEECVEINFFGAERVTEALIPLLQLSTSPRIVNVSSRRGKFKFMPNEWARGVFDDINNVTNEKLGEVLREFLKDYKEGALETKNWPTFVSGYTMAKAALNSYTRLLALKLPRFRINCLCPDFVKTDINEMKGFLSIDEGAECPVNLALLPDDGPSGLFFLHDEVISY* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0988 293 Gene3D - 1 293 - -
Mtr8g0988 293 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 293 - -
Mtr8g0988 293 CDD carb_red_PTCR-like_SDR_c 7 293 IPR045313 GO:0016616
Mtr8g0988 293 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mtr8g0988 293 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mtr8g0988 293 PRINTS Glucose/ribitol dehydrogenase family signature 149 165 IPR002347 -
Mtr8g0988 293 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Mtr8g0988 293 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Mtr8g0988 293 Pfam short chain dehydrogenase 8 168 IPR002347 -
Mtr8g0988 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
Mtr8g0988 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mtr8g0988 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 IPR002347 -
Mtr8g0988 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
Mtr8g0988 293 PANTHER OXIDOREDUCTASE-RELATED 1 293 - -
Mtr8g0988 293 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 205 233 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0988 Mtr-Chr8 11999997 12002469 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0988 3 288 Acyl Lipid Metabolism Gene Families AT1G63380 21.959 5.58e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0988 K15095 - gmx:100802560 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0988 8 11999997 12002469 Mtr8g0988 8 11999997 12002469 ECH
Mtr8g0988 8 11999997 12002469 Mtr7g1948 7 35589813 35592169 PCT