Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1948 ATGGGGACAGAAGCCATAAGGTATGCTGTTGTGACAGGAGCAAATAAGGGAATTGGTTATGGAATATGTAAGAAACTTGCTTCAAGTGGTGTTGTCGTTGTGTTAACAGCTAGAAATGAAGAGAGGGGCTTGGAAGCAGTAGAAAGACTAAAAAATGAGTTTGATTTCTCTGACTTTGTGGTTTTTCATCAGCTTGATGTTGATGACCCTGCTAGTGTTGCATCTTTAGCTTCTTTCATTAAAACCATGTTTGGGAAACTTGATATCTTGGTGAATAATGCAGGTGTTCCTGGGGGCAAATTAATAGATGGTGATGCTCTACTTAGAAAGAGAAATGGAGCAGAAATTGATACCAAGGAAATAGGGTATGAAACCTATGAGTTAGCTGAAAAATGTTTGAAAACAAACTTCTATGGAGTAGAAAGAGTAACAGAAGCTCTTGTTCCTCTTCTTCAACTATCCACTTCTCCAACAATTGTCAATGTTTCCTCCAGAGCAGGACTATTGAAAAATATATCAAATGAGTGGGCTAGAATAGTGTTTAATGACATTGAAAACCTAACAAAGGAAAAAATAGATGAGGTGCTAAAAGAGTTTGAGAAAGATTACAAAGAAGGATCACTAGAGATCAAAGATTGGCCAACTTTTGCTTCTGCTTATACAATGTCAAAAGCAGCTTTAAATGCTTACACAAGGATAATGGCCAAGAAATATCCTCATTTTCATATAAACTCTGTGTGTCCTGGCTTTGTCAAGACTGATATGAATAACAATATTGGAAACTTAAGCATTGATGAAGGTGTTGAAACTCCTTTAATGTTGGCACTATGGTCAAATAATGGTCCTTCTGGTTGTTTCTTTAATAAGGGTGAAGTAATATCCTTTTGA 888 0.3637 MGTEAIRYAVVTGANKGIGYGICKKLASSGVVVVLTARNEERGLEAVERLKNEFDFSDFVVFHQLDVDDPASVASLASFIKTMFGKLDILVNNAGVPGGKLIDGDALLRKRNGAEIDTKEIGYETYELAEKCLKTNFYGVERVTEALVPLLQLSTSPTIVNVSSRAGLLKNISNEWARIVFNDIENLTKEKIDEVLKEFEKDYKEGSLEIKDWPTFASAYTMSKAALNAYTRIMAKKYPHFHINSVCPGFVKTDMNNNIGNLSIDEGVETPLMLALWSNNGPSGCFFNKGEVISF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1948 295 Pfam Enoyl-(Acyl carrier protein) reductase 213 261 - -
Mtr7g1948 295 CDD carb_red_PTCR-like_SDR_c 7 295 IPR045313 GO:0016616
Mtr7g1948 295 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 207 235 IPR020904 GO:0016491
Mtr7g1948 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 283 IPR036291 -
Mtr7g1948 295 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Mtr7g1948 295 PRINTS Glucose/ribitol dehydrogenase family signature 85 96 IPR002347 -
Mtr7g1948 295 PRINTS Glucose/ribitol dehydrogenase family signature 151 167 IPR002347 -
Mtr7g1948 295 PRINTS Glucose/ribitol dehydrogenase family signature 220 239 IPR002347 -
Mtr7g1948 295 PRINTS Glucose/ribitol dehydrogenase family signature 239 256 IPR002347 -
Mtr7g1948 295 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 295 - -
Mtr7g1948 295 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 295 - -
Mtr7g1948 295 Pfam short chain dehydrogenase 8 171 IPR002347 -
Mtr7g1948 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 IPR002347 -
Mtr7g1948 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 IPR002347 -
Mtr7g1948 295 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 220 239 IPR002347 -
Mtr7g1948 295 Gene3D - 5 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1948 Mtr-Chr7 35589813 35592169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1948 9 259 Miscellaneous Gene Families AT2G29150 27.059 1.09e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1948 K15095 - gmx:100789626 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1948 7 35589813 35592169 Mtr7g1948 7 35589813 35592169 ECH
Mtr7g1948 7 35589813 35592169 Mtr8g0986 8 11976192 11979104 PCT
Mtr8g0988 8 11999997 12002469 Mtr7g1948 7 35589813 35592169 PCT