Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0940 ATGGAGCACAAAGAAGAAGTTTTCGAGTTTCTCGGAAGCGTTCCGTTGCTACAGAGGCTGCCTAGTTCGTCTATAAGGAAGATATCAGAGCTTGTGATTGTTAAACACTATGAGCGAGGGGATTATGTTGCTCGTGAGGGTGAACCAGGAGATGGCACTTACTTCATATGGGATGGAGAGGCCAAGGTTGTTGGATCTGTTAGTGACAATGATGAAAGTCGTTCAGAGTTCCAATTGAATAAATATGACTACTTTGGTTGTGGTTTGTCAAATACAGTTCACCTCACAGATGTTGTTGCTTTGTCTAAGCTAACATGCTTATTACTTCCTCGGAAGCACTTGGCACTGCTATGGCCAAAGTTTATATGGACTGCAGAAAAATGTCTTGAGAGACCCTCATCTGTGGAGAATATATTGCAATTAGAACCATTAGAGGTAGATATCTTCCAAGGAATCACTCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGGGGACAGATGGTTGGACAGGCACTAGCTGCAGCATCAAAATCTGTTGACAGTCTTAAGTTACTTCATAGTTTGCATTCCTATTTTCTTCGCATAGGAGACTTAAACTTGCCTATTATATATCAAGTTCATCGTATCAGCGACGGAAGGAGTTTTGCTACAAGGAAAGTGGATGCAATGCAAAACGGAAAAGTCATATTCACTTTGCTGGCTTCATTTCATAGACAAGAATCAGGGTTTGACCACCAGGAAGTAGATATGCCATTAGTCCCTGCACCAGAAATGCTTCTTCCATTAGAAGAGTTACGGGAGAGACGTCTAACTGACCCTCGCTTGCCAATAACTTACCGGAACAAAGTGGCTACATCTGAGTTCATTCCCTGGCCCATAGAGATACGTTTCTGTGAACCTAAAATTGCAACAAATCAGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTCGAGCGAAGGACAAACTTTCAGATGATCAGGCCTTACATAGGTGTGTGGTGGCATATGCTTCCGATCTAATATTTCTTCAAGTAAGTTTGAATCCACATCGTGGGAAAGGTTTCACGGCACGTGGTGTTAGTCTGGACCATGCAATGTGGTTTCACCGACCCTTAAAAGCTGATGAGTGGGTGCTATTTGCGATCTTCACTCCTAGTGCTTATGAAGCACGTGGTTTCGTCATAGGTCAAATGTTCAATCAGAAGGGAGAGCTTCTTGCAACATTGATTCAAGAAGGTCTAACCAGGAACGCTAATCTCCAAATCAAATCCATCAAACCTAAGTTGTGA 1293 0.4261 MEHKEEVFEFLGSVPLLQRLPSSSIRKISELVIVKHYERGDYVAREGEPGDGTYFIWDGEAKVVGSVSDNDESRSEFQLNKYDYFGCGLSNTVHLTDVVALSKLTCLLLPRKHLALLWPKFIWTAEKCLERPSSVENILQLEPLEVDIFQGITLPDAPRFGKVFGGQMVGQALAAASKSVDSLKLLHSLHSYFLRIGDLNLPIIYQVHRISDGRSFATRKVDAMQNGKVIFTLLASFHRQESGFDHQEVDMPLVPAPEMLLPLEELRERRLTDPRLPITYRNKVATSEFIPWPIEIRFCEPKIATNQTKSPPSLRYWFRAKDKLSDDQALHRCVVAYASDLIFLQVSLNPHRGKGFTARGVSLDHAMWFHRPLKADEWVLFAIFTPSAYEARGFVIGQMFNQKGELLATLIQEGLTRNANLQIKSIKPKL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0940 430 Gene3D Jelly Rolls 1 127 IPR014710 -
Mtr8g0940 430 PANTHER ACYL-COA THIOESTERASE 52 428 IPR003703 GO:0006637|GO:0047617
Mtr8g0940 430 CDD Thioesterase_II_repeat2 147 239 - -
Mtr8g0940 430 Gene3D - 130 420 IPR042171 -
Mtr8g0940 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 243 IPR029069 -
Mtr8g0940 430 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Mtr8g0940 430 CDD CAP_ED 16 114 IPR000595 -
Mtr8g0940 430 Pfam Cyclic nucleotide-binding domain 35 115 IPR000595 -
Mtr8g0940 430 CDD Thioesterase_II_repeat1 314 415 - -
Mtr8g0940 430 PANTHER ACYL-COA THIOESTERASE 52 428 - -
Mtr8g0940 430 SMART cnmp_10 16 133 IPR000595 -
Mtr8g0940 430 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 418 IPR029069 -
Mtr8g0940 430 Pfam Thioesterase-like superfamily 162 415 - -
Mtr8g0940 430 SUPERFAMILY cAMP-binding domain-like 5 120 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0940 Mtr-Chr8 11564462 11573695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0940 3 419 Acyl Lipid Metabolism Gene Families AT1G01710 65.707 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0940 K01068 - gmx:100803260 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0940 8 11564462 11573695 Mtr8g0940 8 11564462 11573695 ECH
Mtr7g1988 7 35921927 35928677 Mtr8g0940 8 11564462 11573695 PCT