Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1988 ATGGCGAGGGAAGAAGTGTTCGAGTTCCTCGGTTGCGTTCCTCTGCTTCAGAGGCTTCCTCGATCATCTCTACGGAACATTTCTCAACTTGTTATTGTCAAAAACTATGAGCCCGGAGAGTATGTTGTTCGCGAGGGAGAGCCTGGAGAAGGTCTTTATTTCATTTGGGAAGGAGAGGCTGAGGTTATTGGATCTGGTCTTGCTGATGATGAAAAGGATCTAGAGTTTCAACTGAAAAGATACGACTATTTTGGTTTTGGTTTATCAAATGCAGTTCACCATGCTGATGTCGTAGCTCTGACTAAGCTATCCTGTCTAGTTCTTCCCCTTGAGCACTCGGCACTGTTGCAACCAAAGTCTATATGGAGTGCCGAAAAATCTATTGACACATGCTCACCTGTAGAGCATATATTGCATTTGGAACCAATAGAGGTAGATATTTTTCAAGGAATAACCCCTCCAGATGCTCCAAAATTTGGGAAGGTGTTTGGAGGACAGTTAGTTGGACAGGCATTGGCTGCGGCATCAAAGTCTGTTGATTGTCAAAAAGTTGTCCATAGCTTGCATGTGTATTTCCTTCTCGCAGGGGATTTTAACATACCAATTCTATATAAAGTTAAGCGTCTGCGTGATGGGAAGAGTTTTGCCACGAGGAAAGTGGATGCAATTCAAAAGGGAAACATCATATTCACTTTGCTCGCTTCATTCCAGAAAGAAGAATTAGGGTTTCAACACCAGGAAGTGTCTATGCCATCTGTCCCTACCCCAGATGAGCTTGTATCAATGGAAGAGTTACGAGAGCAACGTCTTACTGACCCTCGTCTTCCAAGAACTTACCGGGCCAAAGTTGCTGCAGCTGAGTTCATTCCCTGGCCCATAGAGATACGCTTCTGTGAACCTAGACCTGCAACAAATCAGACCAAGTCTCCTCCTAGTTTGAGGTACTGGTTTAGAGCAAAGGGAAAATTGTCAGATGATCCGGCCTTGCATAGGTGTGTGGCAGCATTTGCTTCTGATCTAATATTTCTTCAAATAAGTGTGAATCCCCATCGTCGGGTGGGCTTAAAGACGCGTGCAGTGAGTTTAGACCACTCCATGTGGTTTCACAGACCTTATAGAGCTGATGACTGGATACTATTTGTGATCTTTAGTCCTACTGCCTTTAATGCACGCGGCTATGTTACAGGCCGAATGTTCAATCAGAAGGGAGAGCTTCTTGTTTCATTGGTTCAAGAAGGCCTCGCGAGGAAGGAGATTCCCAAAAGATCAGCTACCAACTCTAAGTTGTGA 1290 0.4457 MAREEVFEFLGCVPLLQRLPRSSLRNISQLVIVKNYEPGEYVVREGEPGEGLYFIWEGEAEVIGSGLADDEKDLEFQLKRYDYFGFGLSNAVHHADVVALTKLSCLVLPLEHSALLQPKSIWSAEKSIDTCSPVEHILHLEPIEVDIFQGITPPDAPKFGKVFGGQLVGQALAAASKSVDCQKVVHSLHVYFLLAGDFNIPILYKVKRLRDGKSFATRKVDAIQKGNIIFTLLASFQKEELGFQHQEVSMPSVPTPDELVSMEELREQRLTDPRLPRTYRAKVAAAEFIPWPIEIRFCEPRPATNQTKSPPSLRYWFRAKGKLSDDPALHRCVAAFASDLIFLQISVNPHRRVGLKTRAVSLDHSMWFHRPYRADDWILFVIFSPTAFNARGYVTGRMFNQKGELLVSLVQEGLARKEIPKRSATNSKL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1988 429 Pfam Thioesterase-like superfamily 160 414 - -
Mtr7g1988 429 SUPERFAMILY cAMP-binding domain-like 3 112 IPR018490 -
Mtr7g1988 429 Gene3D Jelly Rolls 1 123 IPR014710 -
Mtr7g1988 429 Pfam Cyclic nucleotide-binding domain 34 111 IPR000595 -
Mtr7g1988 429 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Mtr7g1988 429 Gene3D - 129 418 IPR042171 -
Mtr7g1988 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Mtr7g1988 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 416 IPR029069 -
Mtr7g1988 429 PANTHER ACYL-COA THIOESTERASE 51 429 - -
Mtr7g1988 429 CDD Thioesterase_II_repeat1 313 414 - -
Mtr7g1988 429 CDD CAP_ED 15 112 IPR000595 -
Mtr7g1988 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 240 IPR029069 -
Mtr7g1988 429 SMART cnmp_10 15 132 IPR000595 -
Mtr7g1988 429 TIGRFAM tesB: acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Mtr7g1988 429 CDD Thioesterase_II_repeat2 146 238 - -
Mtr7g1988 429 PANTHER ACYL-COA THIOESTERASE 51 429 IPR003703 GO:0006637|GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1988 Mtr-Chr7 35921927 35928677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1988 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 65.501 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1988 K01068 - gmx:100813197 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1988 7 35921927 35928677 Mtr7g1988 7 35921927 35928677 ECH
Mtr7g1988 7 35921927 35928677 Mtr8g0940 8 11564462 11573695 PCT