Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0927 ATGTCAGAAACTGACATGGCCGTTATTAAACCCGAGATGATGAAGCCTTATGTGTGGCTTCAAACTTCCGATGAATCAATCCAACAAGTGGAACAAGAGATTGCGATGTTTTGTCCATTTATATGTCAAGAAATATTACAAAAAGGCAATGGAACTTCCAAGAATTGTGCAGTATGTCTTCCTCAACAAGTCAGTCCTGCAATGCTGAGCTTAATTCTTGATTACTGTCGATTTCATCAAGTACTAGGCCGCTCAAACAAGGAACGGAAGGCTTATGATGAGAAATTCGTTAGGATAGACACAGAGAAGCTCTGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTAAAGCCATTGGTTGATCTCACCAGTCGTGCTCTTGCTCGAATAATTGAAGGAAGATCACCGGAGGAGATACGTGATATATTTCATTTGCCTGATGATCTTACAGAGGTGTCTGGTGCTTGTGAGAACTCTGAAGAGAAGTTGGAGCCCTTGAGAAACATAACTGATGATCCAAGGATAAGGCTTTTGAACCGCTTGTATGCCAAGAAGAGGAAAGAGCTTAAAGAGCGTGAGAGGATAAAGAATGTTGAAGCTGAAGAAGAGCATGTAGACGAACGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGGAGATCCGAAGGGGATTAAAACTTCCAAGAATAAAAAGAAGAACCGAAGGAAAAAAGACCAACAGAAGAATTCTTCTTTGAAGGAATCATCTGTACCACATAAGAAGGCGGAGGTAAATGGTCATAATAACAGACATCAAAGTTCGGAAGCTGATAGACCGTGTGAGACCTCAAGCTTATTCCATACAGACTATGATCCTATGATTGAGTTTGATGATGACGACGACGATATAGATGATGATATAGATGATCCGGTATTAAAAGCAAAAATTGACAGGGAAGTGGAAGATTTTGCCCGCAGATTAAATTCTGACTGGCCAGAGAGAATAAAAGACTTTTTGTCATCCTCACAAGAAAGGAAGACGATGCTTTTTACTACCAATGGGAATGGCTTTCTAGGGCGACATACTTGA 1077 0.4048 MSETDMAVIKPEMMKPYVWLQTSDESIQQVEQEIAMFCPFICQEILQKGNGTSKNCAVCLPQQVSPAMLSLILDYCRFHQVLGRSNKERKAYDEKFVRIDTEKLCELTSAADSLQLKPLVDLTSRALARIIEGRSPEEIRDIFHLPDDLTEVSGACENSEEKLEPLRNITDDPRIRLLNRLYAKKRKELKERERIKNVEAEEEHVDERSVDDLLSFINGNDGDPKGIKTSKNKKKNRRKKDQQKNSSLKESSVPHKKAEVNGHNNRHQSSEADRPCETSSLFHTDYDPMIEFDDDDDDIDDDIDDPVLKAKIDREVEDFARRLNSDWPERIKDFLSSSQERKTMLFTTNGNGFLGRHT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0927 358 Gene3D Potassium Channel Kv1.1; Chain A 12 164 IPR011333 -
Mtr8g0927 358 Pfam Skp1 family, dimerisation domain 117 151 IPR016072 GO:0006511
Mtr8g0927 358 PANTHER SKP1 1 280 IPR016897 GO:0006511
Mtr8g0927 358 SUPERFAMILY POZ domain 16 80 IPR011333 -
Mtr8g0927 358 MobiDBLite consensus disorder prediction 215 281 - -
Mtr8g0927 358 SUPERFAMILY Skp1 dimerisation domain-like 87 150 IPR036296 GO:0006511
Mtr8g0927 358 Coils Coil 183 203 - -
Mtr8g0927 358 SMART skp1_3 15 116 IPR001232 GO:0006511
Mtr8g0927 358 MobiDBLite consensus disorder prediction 243 273 - -
Mtr8g0927 358 PANTHER LIGASE, PUTATIVE-RELATED 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0927 Mtr-Chr8 11413143 11420406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0927 - - gmx:100794666 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0927 8 11413143 11420406 Mtr8g0927 8 11413143 11420406 ECH
Mtr8g0927 8 11413143 11420406 Mtr7g2000 7 36105425 36112654 ECH
Mtr7g2000 7 36105425 36112654 Mtr8g0927 8 11413143 11420406 PCT