Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g2000 ATGTCGGAAGTCGACATGTCAGTTATTAAACCCGAGATGATGAAGCCCTATATTTGGCTTCAGACTTCGGATGGTTCAATTCAACAGGTGGAACAAGAAATTGCAATGTTTTGCCCTCTTATTTGTCAAGAAATAATACAAAAAGGCACGGGATCTTCCAAAAATTGTGCGATATGTCTTCCTGAAAAAGTCTCTCCTGCTATGTTGAGCTTAGTTCTTGATTATTGTCGTTTTCATCAAGTACCAGGCCGCTCAAACAAGGAACGGAAGTCTCATGACGAGAAATTCATAAGGATGGATACCAAACGGCTCTGTGACTTGACATCTGCTGCCGACAGCCTTCAATTGAGACCGTTAGTTGATCTTACAAGCCGTACACTTGCAAGAATAATTGAAGGAAAATCTCCTGAGGAGATACGGGAGATATTTCATTTGCCGGATGATCTAACAGAGGAAGAGAAGTTAGAGCCTCTGAAAAATACAACTGATGACCCGAGGATAAGGCTCTTGAACCGGTTGTATGCGAAAAAAAGGAAAGAGCTAAAAGAACGTGGGAGGTTAAAGAATGTTGAATTAGAAGAAGAGCATGTAGATGAGCGTTCGGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGCAGATTCAAAAGTGTCTAAAACTTCTAAGAATAAAAAGAAGAACAGAAGAAAAAAAGAGCAGAAGAAGAGCTCTTCTTTGACTGAAGCTTCCAAACAGAAAAATAAGGAGTTAAATGGTCATAGTGCTGTATCTGATATTGCTGGGACCTCAAATATGCTTACAGAAGATGACGCTTTTGCTCATAGAGAGTTTGGTGATGATGACGACAACATAGATGATGAGATCGATCCGGCACTGCAGGAGAAAATTGACAAGGAAGTAGAAGATTTTGCCCGCCGATTAAATTCTGACTGGCCAGAAAGGATGCAAGAATTTTTAACAGGGCAAGAAAGGACGTCAATGCTTTTTGCTACAAACGGGAATGGTTTTCTAAGGCGAAATACTTGA 1029 0.4004 MSEVDMSVIKPEMMKPYIWLQTSDGSIQQVEQEIAMFCPLICQEIIQKGTGSSKNCAICLPEKVSPAMLSLVLDYCRFHQVPGRSNKERKSHDEKFIRMDTKRLCDLTSAADSLQLRPLVDLTSRTLARIIEGKSPEEIREIFHLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERGRLKNVELEEEHVDERSVDDLLSFINGNDADSKVSKTSKNKKKNRRKKEQKKSSSLTEASKQKNKELNGHSAVSDIAGTSNMLTEDDAFAHREFGDDDDNIDDEIDPALQEKIDKEVEDFARRLNSDWPERMQEFLTGQERTSMLFATNGNGFLRRNT* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g2000 342 SUPERFAMILY POZ domain 16 80 IPR011333 -
Mtr7g2000 342 PANTHER SKP1 1 278 IPR016897 GO:0006511
Mtr7g2000 342 MobiDBLite consensus disorder prediction 213 263 - -
Mtr7g2000 342 Pfam Skp1 family, dimerisation domain 118 154 IPR016072 GO:0006511
Mtr7g2000 342 SUPERFAMILY Skp1 dimerisation domain-like 91 160 IPR036296 GO:0006511
Mtr7g2000 342 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
Mtr7g2000 342 PANTHER SKP1-LIKE PROTEIN 20 1 278 - -
Mtr7g2000 342 Pfam Skp1 family, tetramerisation domain 17 80 IPR016073 GO:0006511
Mtr7g2000 342 MobiDBLite consensus disorder prediction 235 249 - -
Mtr7g2000 342 SMART skp1_3 15 116 IPR001232 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g2000 Mtr-Chr7 36105425 36112654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g2000 - - gmx:100809439 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2000 7 36105425 36112654 Mtr7g2000 7 36105425 36112654 ECH
Mtr8g0927 8 11413143 11420406 Mtr7g2000 7 36105425 36112654 ECH
Mtr7g2000 7 36105425 36112654 Mtr8g0927 8 11413143 11420406 PCT