Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0835 ATGCCAATACTAACATATATGATTACATGTGTTGATCTATCAGTATCATATGTGTATGTCCTTCAATACAATAGCATAAACGTGCAGGTGAAGGAGTGTGTGAAGATGAAGGAAATAACTGAGAAATTTGACATGGAAAAGGTGATAGAAGAATTTGAGAGGCTAACAAAGGATGCTGAGAATGTTCAGAAGGAGACACTGAAGAGGATTTTGGAAGAAAATGCATCAGCTGAATACTTGCAGAGTTTAGGACTGAATGGAAGAACTGATCCTGAAAGCTTCAAGGCATGTGTTCCATTGGTCACTTACAAAGATTTGGAACCTTATATTAATAGAATTGTTGATGGTGATGTTTCTCCTATTCTCACCGGAAAACCAATCACTGCTATCTCCTTAAGTTCTGGTACTAGTCAAGGGAAGCAAAAATGTATACCATGGAATGATGAATTGTTTGAAACCACAGTGCAGATATATCAAACCTCTTTTGCCTTTAGGAACAAAGAGTTTCCTATCCAAAATGGCAAGGCCTTAAGCTTCATCTACAGCAGCAAATTATCACAAACAAAAGGGGGTGTGACAGCAGGAACAGCCACAGCAAATGTGTTCAGTCATCCAGGATACAGGCATACCATGCAGGCATTAAAATCCCCTAGTGTCAGTCCAGATGAAGTAATATTTAGTCCTGATTTTCAGCAAACACTCTACTGCCACCTCTTATGTGGACTACTTTTCAGAGAAGAAGTTAGTTTAATTTCAGCACCATTTGCACACAGCCTTGTGAATGCTTTCAGAACATTTGAACAAGTTTGGGAGGAACTTGTTACTGATATCAGAGAAGGTGTTCTTAGCAGTAGAATCACACATCCATTCATTAGAACTGCTATGTCTAAACTGCTGACACCAAATCCTGAACTAGCTAACTTGATCCACAAGAAATGCATAGGATTGAGCAATTGGTATGGATTGATACCGGAGCTTTTCCCTAATGCTAAGTATCTTCTAGGGATCATGACAGGTTCAATGGAACATTACTTGAAAAAGTTGAGACACTATGCAGGAGAGGTTCCTTTGGTGACTTCTGAGTATGGCTCTTCTGAAGGTTGGATTGCTTCAAATGTGAATCCTAAAGTGGCTCCTGAGTTTGCTACTTATGTTGTTCTTCCTCAAATTGCTTACTTTGAATTCATTCCTTTGAAACAACTTGATGGAACTAAGGTGGAGCTTGAGCCAGTTGGATTAACTGATGTGAAGATCGGCGAGGAGTATGAGGTTGTTTTCACCAATCCTGCAGGCTTATACAGGTATAAGCTAGGAGATGTAGTAAAGGTTATAGGGTTACGTAACTCAACTCCAGAAATCAGGTTTATTCGCAGGAACAATCTTATGCTTACAATCAACATTGACAAGAACACAGAAGTTGATTTGCAACTATCAGTGGAAACAGCATCCAAGTTGTTAGCTGAGGAGAAAATTGAAGTGATTGACTACACTAGCTACATTGATTTATCGAAAGAACCAGGACATTATGTTATCTTCTGGGAAATCAGTGGCGAAGCAAGTGATGATGTGCTTGATGAATGTTGTACATGCTTGGACAAGTCTTTTGTTGATCTTGGCTATGTTAGTTCTAGGAAAGTCAAAGGCATTGGAGCCCTTGAACTCCGACTTGTTCGAAAAGGAACATTCCAGAAGATTCTTGAGCATTATGTTGGATTAGGAGCATCTGCGGCTCAATTCAAGACACCTAGGTGCATTGGTCCTACAAACACCAAAGTGTTGCAAATATTGCTGGAAAATGTTGTCAAGAACTATATTAGTTCTGCTTACAATTGA 1833 0.3933 MPILTYMITCVDLSVSYVYVLQYNSINVQVKECVKMKEITEKFDMEKVIEEFERLTKDAENVQKETLKRILEENASAEYLQSLGLNGRTDPESFKACVPLVTYKDLEPYINRIVDGDVSPILTGKPITAISLSSGTSQGKQKCIPWNDELFETTVQIYQTSFAFRNKEFPIQNGKALSFIYSSKLSQTKGGVTAGTATANVFSHPGYRHTMQALKSPSVSPDEVIFSPDFQQTLYCHLLCGLLFREEVSLISAPFAHSLVNAFRTFEQVWEELVTDIREGVLSSRITHPFIRTAMSKLLTPNPELANLIHKKCIGLSNWYGLIPELFPNAKYLLGIMTGSMEHYLKKLRHYAGEVPLVTSEYGSSEGWIASNVNPKVAPEFATYVVLPQIAYFEFIPLKQLDGTKVELEPVGLTDVKIGEEYEVVFTNPAGLYRYKLGDVVKVIGLRNSTPEIRFIRRNNLMLTINIDKNTEVDLQLSVETASKLLAEEKIEVIDYTSYIDLSKEPGHYVIFWEISGEASDDVLDECCTCLDKSFVDLGYVSSRKVKGIGALELRLVRKGTFQKILEHYVGLGASAAQFKTPRCIGPTNTKVLQILLENVVKNYISSAYN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0835 610 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 36 610 IPR004993 -
Mtr8g0835 610 Coils Coil 45 65 - -
Mtr8g0835 610 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 36 610 - -
Mtr8g0835 610 Pfam GH3 auxin-responsive promoter 51 585 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0835 Mtr-Chr8 10327126 10331185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0835 44 607 EF-hand Containing Proteins AT1G23160 39.100 7.77e-139 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0835 K14506 - gmx:100806209 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0835 8 10327126 10331185 Mtr8g0835 8 10327126 10331185 ECH
Mtr7g3857 7 55404906 55410501 Mtr8g0835 8 10327126 10331185 PCT